Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli 12009 (NC_013353) Location : 5063784 - 5119958 bp Size : 56175 bp GC content : 47.0 % GC bias (=GCregion - GCgenome) : -3.63 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | lysU | YP_003224702.1 | 5063784-5065301 | 1518 | - | lysine tRNA synthetase LysU, inducible | Virulence |
2 | yjdL | YP_003224703.1 | 5065538-5066995 | 1458 | - | transporter | - |
3 | cadA | YP_003224704.1 | 5067054-5069201 | 2148 | - | lysine decarboxylase 1 | Virulence |
4 | cadB | YP_003224705.1 | 5069281-5070615 | 1335 | - | lysine/cadaverine transporter | Virulence |
5 | cadC | YP_003224706.1 | 5070981-5072519 | 1539 | - | DNA-binding transcriptional activator CadC | - |
6 | NA | YP_003224707.1 | 5073268-5074110 | 843 | - | hypothetical protein | Virulence |
7 | NA | YP_003224708.1 | 5074195-5074392 | 198 | - | hypothetical protein | Virulence |
8 | NA | YP_003224709.1 | 5074404-5074892 | 489 | - | hypothetical protein | Virulence |
9 | NA | YP_003224710.1 | 5074889-5075266 | 378 | - | hypothetical protein | Virulence |
10 | NA | YP_003224711.1 | 5075313-5075687 | 375 | - | hypothetical protein | Virulence |
11 | NA | YP_003224712.1 | 5075762-5075983 | 222 | - | hypothetical protein | Virulence |
12 | NA | YP_003224713.1 | 5076052-5076528 | 477 | - | DNA repair protein | Virulence |
13 | NA | YP_003224714.1 | 5076543-5077028 | 486 | - | hypothetical protein | Virulence |
14 | NA | YP_003224715.1 | 5077119-5077937 | 819 | - | hypothetical protein | Virulence |
15 | NA | YP_003224716.1 | 5078321-5081167 | 2847 | - | AidA-I adhesin-like protein | Virulence |
16 | NA | YP_003224717.1 | 5081539-5082411 | 873 | - | hypothetical protein | Virulence |
17 | NA | YP_003224718.1 | 5082510-5083382 | 873 | - | hypothetical protein | - |
18 | NA | - | 5084381-5085264 | 884 | - | - | - |
19 | NA | - | 5084423-5085310 | 888 | - | - | - |
20 | NA | - | 5085255-5085551 | 297 | - | - | - |
21 | NA | - | 5085264-5085605 | 342 | - | - | - |
22 | NA | YP_003224719.1 | 5085841-5086449 | 609 | - | hypothetical protein | Virulence |
23 | NA | YP_003224720.1 | 5086538-5086744 | 207 | - | regulatory protein | Virulence |
24 | NA | YP_003224721.1 | 5086802-5087116 | 315 | - | hypothetical protein | - |
25 | NA | YP_003224722.1 | 5087459-5087647 | 189 | + | transcriptional regulator | - |
26 | NA | YP_003224723.1 | 5088290-5088859 | 570 | + | hypothetical protein | Virulence |
27 | NA | YP_003224724.1 | 5089027-5089410 | 384 | + | hypothetical protein | Virulence |
28 | NA | YP_003224725.1 | 5089407-5089832 | 426 | + | hypothetical protein | Virulence |
29 | NA | YP_003224726.1 | 5090005-5090274 | 270 | + | hypothetical protein | - |
30 | NA | - | 5090522-5090665 | 144 | - | - | - |
31 | NA | YP_003224727.1 | 5090696-5091970 | 1275 | - | hypothetical protein | - |
32 | NA | YP_003224728.1 | 5092144-5092470 | 327 | + | IS629 transposase OrfA | - |
33 | NA | YP_003224729.1 | 5092470-5093357 | 888 | + | IS629 transposase OrfB | - |
34 | NA | YP_003224730.1 | 5093621-5093971 | 351 | - | hypothetical protein | - |
35 | NA | YP_003224731.1 | 5093968-5094393 | 426 | - | hypothetical protein | - |
36 | NA | - | 5094479-5094524 | 46 | - | - | - |
37 | NA | - | 5094480-5094875 | 396 | - | - | - |
38 | NA | - | 5094525-5094947 | 423 | + | - | - |
39 | NA | YP_003224732.1 | 5095047-5104718 | 9672 | - | Efa1/LifA-like protein | Virulence |
40 | NA | - | 5105067-5106463 | 1397 | - | - | - |
41 | NA | - | 5105370-5106215 | 846 | - | - | - |
42 | nleE | YP_003224733.1 | 5106593-5107267 | 675 | - | T3SS effector NleE-like protein | Virulence |
43 | nleB1 | YP_003224734.1 | 5107316-5108305 | 990 | - | T3SS effector NleB-like protein | Virulence |
44 | NA | - | 5108532-5108677 | 146 | - | - | - |
45 | NA | - | 5108687-5108746 | 60 | - | - | - |
46 | NA | - | 5108747-5108858 | 112 | - | - | - |
47 | espL2 | YP_003224735.1 | 5108913-5110562 | 1650 | - | T3SS effector EspL-like protein | Virulence |
48 | NA | YP_003224736.1 | 5110770-5110997 | 228 | - | hypothetical protein | - |
49 | NA | - | 5111281-5112240 | 960 | - | - | - |
50 | NA | - | 5111337-5112785 | 1449 | - | - | - |
51 | NA | YP_003224737.1 | 5112525-5112923 | 399 | - | hypothetical protein | - |
52 | NA | YP_003224738.1 | 5113241-5113414 | 174 | + | hypothetical protein | - |
53 | NA | YP_003224739.1 | 5113541-5113951 | 411 | + | PagC-like protein | Virulence |
54 | NA | YP_003224740.1 | 5114267-5115142 | 876 | + | truncated helicase | - |
55 | NA | YP_003224741.1 | 5114943-5116391 | 1449 | - | hypothetical protein | - |
56 | NA | YP_003224742.1 | 5116411-5116758 | 348 | - | hypothetical protein | - |
57 | NA | YP_003224743.1 | 5116755-5117429 | 675 | - | hypothetical protein | - |
58 | NA | - | 5117512-5117644 | 133 | + | - | - |
59 | NA | YP_003224744.1 | 5117683-5118303 | 621 | + | hypothetical protein | - |
60 | NA | YP_003224745.1 | 5118420-5119685 | 1266 | - | integrase | - |
61 | tRNA-Phe | - | 5119883-5119958 | 76 | - | tRNA-Phe | - |