PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli 11128 (NC_013364)
Location : 1920627 - 1935054 bp
Size : 14428 bp
GC content : 46.9 %
GC bias (=GCregion - GCgenome) : -3.73 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1ydeQ YP_003234344.1 1920627-1921541 915 - putative fimbrial-like adhesin proteinVirulence
2ydeR YP_003234345.1 1921600-1922103 504 - putative fimbrial-like adhesin proteinVirulence
3ydeS YP_003234346.1 1922116-1922646 531 - putative fimbrial-like adhesin proteinVirulence
4NA YP_003234347.1 1922660-1925311 2652 - outer membrane usher proteinVirulence
5NA YP_003234348.1 1925353-1926063 711 - putative fimbrial chaperone proteinVirulence
6NA YP_003234349.1 1926424-1926987 564 - putative type 1 fimbrial proteinVirulence
7yneL YP_003234350.1 1927442-1927621 180 - putative transcriptional regulator-
8hipA YP_003234351.1 1927939-1929261 1323 - regulator with hipB-
9hipB YP_003234352.1 1929261-1929527 267 - DNA-binding transcriptional regulator HipB-
10NA - 1929750-1931078 1329 - --
11NA - 1931114-1933399 2286 - --
12NA YP_003234353.1 1933877-1934188 312 + putative IS602 transposase OrfA-
13NA YP_003234354.1 1934308-1935054 747 + putative IS602 transposase OrfB-