Home PAIs REIs Genomes Search Links |
|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori B8 (NC_014256) Location : 669425 - 720370 bp Size : 50946 bp GC content : 36.1 % GC bias (=GCregion - GCgenome) : -2.67 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | dapB | YP_003728715.1 | 669425-670189 | 765 | + | Dihydrodipicolinate reductase | - |
2 | NA | YP_003728716.1 | 670413-670523 | 111 | - | hypothetical protein | - |
3 | cagB | YP_003728717.1 | 670637-670864 | 228 | + | cag pathogenicity island protein B | Virulence |
4 | cagC | YP_003728718.1 | 671072-671356 | 285 | + | cag pathogenicity island protein C | Virulence |
5 | cagD | YP_003728719.1 | 671340-671984 | 645 | + | cag pathogenicity island protein D | Virulence |
6 | cagE | YP_003728720.1 | 671999-674944 | 2946 | + | cag pathogenicity island protein E | Virulence |
7 | cagF | YP_003728721.1 | 674946-675752 | 807 | + | cag pathogenicity island protein F | Virulence |
8 | cagG | YP_003728722.1 | 675807-676235 | 429 | + | cag pathogenicity island protein G | Virulence |
9 | cagH | YP_003728723.1 | 676237-677349 | 1113 | + | cag pathogenicity island protein H | Virulence |
10 | cagI | YP_003728724.1 | 677360-678505 | 1146 | + | cag pathogenicity island protein I | Virulence |
11 | cagL | YP_003728725.1 | 678502-679215 | 714 | + | cag pathogenicity island protein L | Virulence |
12 | cagN | YP_003728726.1 | 679297-680223 | 927 | - | cag pathogenicity island protein N | Virulence |
13 | cagM | YP_003728727.1 | 680232-681362 | 1131 | - | cag pathogenicity island protein M | Virulence |
14 | NA | YP_003728728.1 | 681666-681782 | 117 | - | hypothetical protein | - |
15 | NA | YP_003728729.1 | 682552-682854 | 303 | - | hypothetical protein | Virulence |
16 | cagQ | YP_003728730.1 | 682562-682942 | 381 | + | cag pathogenicity island protein Q | Virulence |
17 | cagS | YP_003728731.1 | 683384-683983 | 600 | + | cag pathogenicity island protein S | Virulence |
18 | cagT | YP_003728732.1 | 684180-685022 | 843 | - | cag pathogenicity island protein T | Virulence |
19 | cagU | YP_003728733.1 | 685035-685685 | 651 | - | cag pathogenicity island protein U | Virulence |
20 | cagV | YP_003728734.1 | 686072-686830 | 759 | + | cag pathogenicity island protein V | Virulence |
21 | cagW | YP_003728735.1 | 686835-688433 | 1599 | + | cag pathogenicity island protein W | Virulence |
22 | cagX | YP_003728736.1 | 688486-690054 | 1569 | + | cag pathogenicity island protein X | Virulence |
23 | cagY | YP_003728737.1 | 690069-695534 | 5466 | + | cag pathogenicity island protein Y | Virulence |
24 | cagZ | YP_003728738.1 | 695683-696282 | 600 | + | cag pathogenicity island protein Z | Virulence |
25 | virB11-4 | YP_003728739.1 | 696287-697279 | 993 | + | cag pathogenicity island protein alpha | Virulence |
26 | cag5 | YP_003728740.1 | 697288-699534 | 2247 | + | cag pathogenicity island protein beta | Virulence |
27 | NA | YP_003728741.1 | 699579-699698 | 120 | - | hypothetical protein | - |
28 | NA | YP_003728742.1 | 699618-699893 | 276 | + | hypothetical protein | - |
29 | cag4 | YP_003728743.1 | 700014-700523 | 510 | - | cag pathogenicity island protein gamma | Virulence |
30 | cag3 | YP_003728744.1 | 700533-701978 | 1446 | - | cag pathogenicity island protein delta | Virulence |
31 | cag2 | YP_003728745.1 | 701971-702675 | 705 | - | cag pathogenicity island protein epsilon | Virulence |
32 | cag1 | YP_003728746.1 | 702739-703086 | 348 | - | cag pathogenicity island protein zeta | Virulence |
33 | NA | YP_003728747.1 | 703259-704110 | 852 | + | chitin synthase regulatory factor 3 | - |
34 | NA | YP_003728748.1 | 704147-704326 | 180 | + | hypothetical protein | - |
35 | glnA | YP_003728749.1 | 704340-705785 | 1446 | - | glutamine synthetase | Virulence |
36 | NA | YP_003728750.1 | 705923-707986 | 2064 | + | hypothetical protein | - |
37 | rplI | YP_003728751.1 | 708049-708498 | 450 | + | 50S ribosomal protein L9 | - |
38 | hslV | YP_003728752.1 | 708502-709044 | 543 | + | protein HslV | - |
39 | hslU | YP_003728753.1 | 709044-710375 | 1332 | + | heat shock protein HslU | - |
40 | era | YP_003728754.1 | 710375-711280 | 906 | + | GTP-binding protein Era | - |
41 | NA | YP_003728755.1 | 711277-712269 | 993 | + | hypothetical protein | - |
42 | NA | YP_003728756.1 | 712521-713129 | 609 | + | hypothetical protein | - |
43 | NA | YP_003728757.1 | 713090-713659 | 570 | + | hypothetical protein | - |
44 | NA | YP_003728758.1 | 713661-714134 | 474 | + | hypothetical protein | - |
45 | NA | YP_003728759.1 | 714134-714679 | 546 | + | hypothetical protein | - |
46 | NA | YP_003728760.1 | 715093-715953 | 861 | + | regulator of nonsense transcripts 1 | - |
47 | NA | YP_003728761.1 | 716234-716422 | 189 | - | hypothetical protein | - |
48 | cagA | YP_003728762.1 | 716816-720370 | 3555 | + | cytotoxin-associated protein A | Virulence |