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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori PeCan4 (NC_014555) Location : 492445 - 539250 bp Size : 46806 bp GC content : 36.1 % GC bias (=GCregion - GCgenome) : -2.8 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_003926793.1 | 492445-493890 | 1446 | - | glutamine synthetase | Virulence |
2 | NA | YP_003926794.1 | 494028-496100 | 2073 | + | hypothetical protein | - |
3 | rplI | YP_003926795.1 | 496163-496612 | 450 | + | 50S ribosomal protein L9 | - |
4 | NA | YP_003926796.1 | 496616-497158 | 543 | + | ATP-dependent protease peptidase subunit | - |
5 | hslU | YP_003926797.1 | 497158-498489 | 1332 | + | ATP-dependent protease ATP-binding subunit HslU | - |
6 | era | YP_003926798.1 | 498489-499394 | 906 | + | GTP-binding protein Era | - |
7 | NA | YP_003926799.1 | 499391-500383 | 993 | + | hypothetical protein | - |
8 | NA | YP_003926800.1 | 500451-501305 | 855 | - | hypothetical protein | - |
9 | NA | YP_003926801.1 | 501386-501487 | 102 | + | IS606 transposase | - |
10 | NA | YP_003926802.1 | 501576-501923 | 348 | + | cag pathogenicity island protein 1 | Virulence |
11 | NA | YP_003926803.1 | 502151-503596 | 1446 | + | cag pathogenicity island protein (cag3) | Virulence |
12 | NA | YP_003926804.1 | 503606-504115 | 510 | + | cag pathogenicity island protein (cag4) | Virulence |
13 | NA | YP_003926805.1 | 504255-506501 | 2247 | - | cag pathogenicity island protein Beta | Virulence |
14 | NA | YP_003926806.1 | 506510-507502 | 993 | - | virB11-like cag pathogenicity islandencoded protein / ATPase protein | Virulence |
15 | NA | YP_003926807.1 | 507507-508106 | 600 | - | cag pathogenicity island protein Z | Virulence |
16 | NA | YP_003926808.1 | 510659-510754 | 96 | - | hypothetical protein | - |
17 | NA | YP_003926809.1 | 513792-515357 | 1566 | - | cag pathogenicity island protein X | Virulence |
18 | NA | YP_003926810.1 | 515410-517017 | 1608 | - | cag pathogenicity island protein W | Virulence |
19 | NA | YP_003926811.1 | 517022-517780 | 759 | - | cag island protein | Virulence |
20 | NA | YP_003926812.1 | 518055-518702 | 648 | + | cag pathogenicity island protein (cagU, cag11) | Virulence |
21 | NA | YP_003926813.1 | 518718-519560 | 843 | + | CAG pathogenicity island protein 12 | Virulence |
22 | NA | YP_003926814.1 | 519762-520361 | 600 | - | CAG pathogenicity island protein 13 | Virulence |
23 | NA | YP_003926815.1 | 520795-521007 | 213 | - | hypothetical protein | - |
24 | NA | YP_003926816.1 | 521273-521578 | 306 | + | cag pathogenicity island protein (cagQ, cag14) | Virulence |
25 | NA | YP_003926817.1 | 521635-521838 | 204 | + | hypothetical protein | - |
26 | NA | YP_003926818.1 | 521835-521996 | 162 | - | hypothetical protein | - |
27 | NA | YP_003926819.1 | 523305-524435 | 1131 | + | cag pathogenicity island protein (cagM, cag16) | Virulence |
28 | NA | YP_003926820.1 | 524450-525361 | 912 | + | cag pathogenicity island protein (cagN, cag17) | Virulence |
29 | NA | YP_003926821.1 | 525442-526155 | 714 | - | cag pathogenicity island protein L | Virulence |
30 | NA | YP_003926822.1 | 526152-527291 | 1140 | - | cag pathogenicity island protein I | Virulence |
31 | NA | YP_003926823.1 | 527302-528246 | 945 | - | cag pathogenicity island protein H | Virulence |
32 | NA | YP_003926824.1 | 528233-528430 | 198 | + | hypothetical protein | - |
33 | NA | YP_003926825.1 | 528431-528859 | 429 | - | cag pathogenicity island protein G | Virulence |
34 | NA | YP_003926826.1 | 528914-529720 | 807 | - | cag island protein | Virulence |
35 | NA | YP_003926827.1 | 529722-532673 | 2952 | - | cag pathogenicity island protein E | Virulence |
36 | NA | YP_003926828.1 | 532682-533305 | 624 | - | cag pathogenicity island protein D | Virulence |
37 | NA | YP_003926829.1 | 533307-533654 | 348 | - | cag pathogenicity island protein C | Virulence |
38 | NA | YP_003926830.1 | 533797-534024 | 228 | - | cag pathogenicity island protein B | Virulence |
39 | NA | YP_003926831.1 | 534448-538050 | 3603 | + | cytotoxin-associated protein A | Virulence |
40 | NA | YP_003926832.1 | 538483-539250 | 768 | - | glutamate racemase | - |