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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori SJM180 (NC_014560) Location : 504605 - 553166 bp Size : 48562 bp GC content : 36.3 % GC bias (=GCregion - GCgenome) : -2.58 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_003928422.1 | 504605-505369 | 765 | + | dihydrodipicolinate reductase | - |
2 | NA | YP_003928423.1 | 505656-505775 | 120 | + | hypothetical protein | - |
3 | NA | YP_003928424.1 | 505825-506052 | 228 | + | cag pathogenicity island protein B | Virulence |
4 | NA | YP_003928425.1 | 506195-506542 | 348 | + | cag pathogenicity island protein C | Virulence |
5 | NA | YP_003928426.1 | 506517-507167 | 651 | + | cag pathogenicity island protein D | Virulence |
6 | NA | YP_003928427.1 | 507176-510127 | 2952 | + | cag pathogenicity island protein E | Virulence |
7 | NA | YP_003928428.1 | 510129-510935 | 807 | + | cag island protein | Virulence |
8 | NA | YP_003928429.1 | 510990-511418 | 429 | + | cag pathogenicity island protein (cag21) | Virulence |
9 | NA | YP_003928430.1 | 511419-511616 | 198 | - | hypothetical protein | - |
10 | NA | YP_003928431.1 | 511615-512547 | 933 | + | cag pathogenicity island protein H | Virulence |
11 | NA | YP_003928432.1 | 512558-513703 | 1146 | + | cag pathogenicity island protein I | Virulence |
12 | NA | YP_003928433.1 | 513700-514413 | 714 | + | cag pathogenicity island protein L | Virulence |
13 | NA | YP_003928434.1 | 514495-515415 | 921 | - | cag island protein | Virulence |
14 | NA | YP_003928435.1 | 515430-516560 | 1131 | - | cag island protein | Virulence |
15 | NA | YP_003928436.1 | 517762-518142 | 381 | + | cag pathogenicity island protein Q | Virulence |
16 | NA | YP_003928437.1 | 518582-519181 | 600 | + | CAG pathogenicity island protein 13 | Virulence |
17 | NA | YP_003928438.1 | 519383-520225 | 843 | - | CAG pathogenicity island protein 12 | Virulence |
18 | NA | YP_003928439.1 | 520261-520917 | 657 | - | cag island protein | Virulence |
19 | NA | YP_003928440.1 | 521298-522056 | 759 | + | cag pathogenicity island protein V | Virulence |
20 | NA | YP_003928441.1 | 522061-523668 | 1608 | + | cag pathogenicity island protein W | Virulence |
21 | NA | YP_003928442.1 | 523721-525286 | 1566 | + | cag pathogenicity island protein X | Virulence |
22 | NA | YP_003928443.1 | 525301-530781 | 5481 | + | cag island protein | Virulence |
23 | NA | YP_003928444.1 | 530916-531515 | 600 | + | cag pathogenicity island protein (cag6) | Virulence |
24 | NA | YP_003928445.1 | 531520-532512 | 993 | + | cag island protein, DNA transfer protein | Virulence |
25 | NA | YP_003928446.1 | 532521-534767 | 2247 | + | cag island protein, DNA transfer protein | Virulence |
26 | NA | YP_003928447.1 | 534886-535395 | 510 | - | cag pathogenicity island protein Gamma | Virulence |
27 | NA | YP_003928448.1 | 535405-536850 | 1446 | - | cag pathogenicity island protein 3 | Virulence |
28 | NA | YP_003928449.1 | 536850-537200 | 351 | - | cag pathogenicity island protein Epsilon | Virulence |
29 | NA | YP_003928450.1 | 537308-537655 | 348 | - | cag pathogenicity island protein (cag1) | Virulence |
30 | NA | YP_003928451.1 | 537827-538681 | 855 | + | hypothetical protein | - |
31 | NA | YP_003928452.1 | 538912-540357 | 1446 | - | glutamine synthetase | Virulence |
32 | NA | YP_003928453.1 | 540581-540883 | 303 | + | hypothetical protein | - |
33 | rplI | YP_003928454.1 | 541275-541724 | 450 | + | 50S ribosomal protein L9 | - |
34 | NA | YP_003928455.1 | 541728-542270 | 543 | + | ATP-dependent protease peptidase subunit | - |
35 | hslU | YP_003928456.1 | 542270-543601 | 1332 | + | ATP-dependent protease ATP-binding subunit HslU | - |
36 | era | YP_003928457.1 | 543601-544506 | 906 | + | GTP-binding protein Era | - |
37 | NA | YP_003928458.1 | 544503-545495 | 993 | + | conserved hypothetical secreted protein | - |
38 | NA | YP_003928459.1 | 545680-546354 | 675 | + | hypothetical protein | - |
39 | NA | YP_003928460.1 | 546351-546527 | 177 | + | hypothetical protein | - |
40 | NA | YP_003928461.1 | 546603-547385 | 783 | + | hypothetical protein | - |
41 | NA | YP_003928462.1 | 548560-548775 | 216 | + | hypothetical protein | - |
42 | NA | YP_003928463.1 | 549053-549214 | 162 | - | urease-enhancing factor | - |
43 | NA | YP_003928464.1 | 549621-553166 | 3546 | + | cag pathogenicity island protein (cag26) | Virulence |