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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Pseudomonas brassicacearum NFM421 (NC_015379) Location : 6488523 - 6510512 bp Size : 21990 bp GC content : 63.4 % GC bias (=GCregion - GCgenome) : 2.57 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_004356874.1 | 6488523-6489446 | 924 | + | Fis family transcriptional regulator | Virulence |
2 | NA | YP_004356875.1 | 6489540-6489749 | 210 | + | Hrp pili protein | Virulence |
3 | NA | YP_004356876.1 | 6489810-6490739 | 930 | + | type III secretion protein | - |
4 | NA | YP_004356877.1 | 6490799-6491173 | 375 | + | AraC family transcriptional regulator | Virulence |
5 | NA | YP_004356878.1 | 6491188-6492075 | 888 | + | type III secretion protein | Virulence |
6 | NA | YP_004356879.1 | 6492072-6492662 | 591 | + | type III secretion protein | - |
7 | NA | YP_004356880.1 | 6492640-6493233 | 594 | + | type III secretion protein | - |
8 | NA | YP_004356881.1 | 6493287-6493703 | 417 | + | hypothetical protein | - |
9 | NA | YP_004356882.1 | 6493880-6494104 | 225 | + | type III secretion protein | Virulence |
10 | NA | YP_004356883.1 | 6494091-6494528 | 438 | + | type III secretion protein | - |
11 | NA | YP_004356884.1 | 6494521-6496671 | 2151 | + | type III secretion protein | Virulence |
12 | NA | YP_004356885.1 | 6496668-6496877 | 210 | + | type III secretion protein | Virulence |
13 | NA | YP_004356886.1 | 6496884-6497261 | 378 | + | type III negative regulator of hrp expression HrpV | - |
14 | NA | YP_004356887.1 | 6497307-6497756 | 450 | + | type III chaperone protein | Virulence |
15 | NA | YP_004356888.1 | 6497912-6498118 | 207 | - | hypothetical protein | - |
16 | NA | YP_004356889.1 | 6498533-6499633 | 1101 | - | type III secretion protein, membrane protein | Virulence |
17 | NA | YP_004356890.1 | 6499649-6500446 | 798 | - | type III secretion protein | Virulence |
18 | NA | YP_004356891.1 | 6500446-6500700 | 255 | - | type III secretion protein | Virulence |
19 | NA | YP_004356892.1 | 6500710-6501363 | 654 | - | type III secretion protein | Virulence |
20 | NA | YP_004356893.1 | 6501360-6502463 | 1104 | - | type III secretion protein | - |
21 | NA | YP_004356894.1 | 6502460-6502864 | 405 | - | type III secretion protein | - |
22 | NA | YP_004356895.1 | 6503022-6503441 | 420 | - | type III secretion protein | - |
23 | NA | YP_004356896.1 | 6503428-6504786 | 1359 | - | type III secretion protein | Virulence |
24 | NA | YP_004356897.1 | 6504786-6505679 | 894 | - | type III secretion protein | - |
25 | NA | YP_004356898.1 | 6505837-6507924 | 2088 | - | type III secretion protein, membrane protein | Virulence |
26 | NA | YP_004356899.1 | 6507921-6509048 | 1128 | - | type III secretion protein | - |
27 | NA | YP_004356900.1 | 6509110-6509268 | 159 | - | hypothetical protein | - |
28 | NA | YP_004356901.1 | 6509326-6509919 | 594 | + | RNA polymerase sigma factor | - |
29 | NA | YP_004356902.1 | 6509916-6510512 | 597 | + | acetyltransferase | - |