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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Salmonella enterica SL1344 (NC_016810) Location : 294819 - 350828 bp Size : 56010 bp GC content : 52.0 % GC bias (=GCregion - GCgenome) : -0.16 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | tRNA-Asp | - | 294819-294892 | 74 | + | tRNA-Asp | - |
| 2 | yafB | YP_005180185.1 | 295060-295863 | 804 | + | oxidoreductase | - |
| 3 | yafC | YP_005180186.1 | 295884-296798 | 915 | - | transcriptional regulator | - |
| 4 | NA | YP_005180187.1 | 296903-298078 | 1176 | + | putative drug efflux protein | - |
| 5 | NA | YP_005180188.1 | 298231-299010 | 780 | + | hypothetical protein | - |
| 6 | yafE | YP_005180189.1 | 299088-299858 | 771 | + | putative methyltransferase | - |
| 7 | mltD | YP_005180190.1 | 299914-301281 | 1368 | - | membrane-bound lytic murein transglycosylase d | - |
| 8 | gloB | YP_005180191.1 | 301353-302108 | 756 | - | hydroxyacylglutathione hydrolase | - |
| 9 | NA | YP_005180192.1 | 302143-302865 | 723 | + | hypothetical protein | - |
| 10 | rnhA | YP_005180193.1 | 302862-303329 | 468 | - | ribonuclease H | - |
| 11 | dnaQ | YP_005180194.1 | 303393-304124 | 732 | + | DNA polymerase III subunit epsilon | - |
| 12 | tRNA-Asp | - | 304258-304331 | 74 | + | tRNA-Asp | - |
| 13 | sciA | YP_005180195.1 | 304656-305711 | 1056 | - | hypothetical protein | - |
| 14 | sciB | YP_005180196.1 | 305722-306717 | 996 | - | hypothetical protein | - |
| 15 | sciC | YP_005180197.1 | 306714-308597 | 1884 | - | hypothetical protein | Virulence |
| 16 | sciD | YP_005180198.1 | 308613-309107 | 495 | - | hypothetical protein | - |
| 17 | sciE | YP_005180199.1 | 309104-309928 | 825 | - | hypothetical protein | - |
| 18 | sciF | YP_005180200.1 | 309915-310817 | 903 | - | hypothetical protein | - |
| 19 | sciG | YP_005180201.1 | 311185-313824 | 2640 | + | hypothetical protein | Virulence |
| 20 | sciH | YP_005180202.1 | 313924-314466 | 543 | + | hypothetical protein | Virulence |
| 21 | sciI | YP_005180203.1 | 314490-315983 | 1494 | + | hypothetical protein | Virulence |
| 22 | sciJ | YP_005180204.1 | 316169-316615 | 447 | + | hypothetical protein | - |
| 23 | sciK | YP_005180205.1 | 316869-317354 | 486 | + | hypothetical protein | Virulence |
| 24 | NA | YP_005180206.1 | 317659-318144 | 486 | + | hypothetical protein | - |
| 25 | NA | YP_005180207.1 | 318129-318512 | 384 | + | hypothetical protein | - |
| 26 | sciK1 | YP_005180208.1 | 318655-319140 | 486 | + | hypothetical protein | Virulence |
| 27 | sciN | YP_005180209.1 | 319207-319743 | 537 | + | lipoprotein | - |
| 28 | sciO | YP_005180210.1 | 319747-321090 | 1344 | + | hypothetical protein | - |
| 29 | sciP | YP_005180211.1 | 321087-322391 | 1305 | + | hypothetical protein | - |
| 30 | sciQ | YP_005180212.1 | 322396-323169 | 774 | + | putative membrane protein, virulence associated protein | - |
| 31 | sciR | YP_005180213.1 | 323372-323803 | 432 | + | hypothetical protein | - |
| 32 | sciS | YP_005180214.1 | 323837-327706 | 3870 | + | IcmF-related integral membrane ATP-binding protein, virulence associated protein | - |
| 33 | sciT | YP_005180215.1 | 327706-328494 | 789 | + | hypothetical protein | - |
| 34 | sciU | YP_005180216.1 | 328491-328907 | 417 | + | secreted protein | - |
| 35 | sciV | YP_005180217.1 | 328931-329452 | 522 | + | hypothetical protein | - |
| 36 | vrgS | YP_005180218.1 | 329849-332038 | 2190 | + | Type VI secretion protein | - |
| 37 | sciW | YP_005180219.1 | 332062-332508 | 447 | + | hypothetical protein | - |
| 38 | NA | YP_005180220.1 | 332521-336123 | 3603 | + | Rhs family protein | - |
| 39 | NA | YP_005180221.1 | 336117-336380 | 264 | + | hypothetical protein | - |
| 40 | NA | - | 336396-337313 | 918 | + | - | - |
| 41 | sciX | YP_005180222.1 | 337307-337753 | 447 | + | hypothetical protein | - |
| 42 | sciY | - | 338265-338753 | 489 | + | - | - |
| 43 | NA | YP_005180223.1 | 339522-339830 | 309 | + | hypothetical protein | - |
| 44 | NA | - | 339867-340180 | 314 | - | - | - |
| 45 | NA | - | 340233-340373 | 141 | + | - | - |
| 46 | NA | - | 340510-340975 | 466 | + | - | - |
| 47 | safA | YP_005180224.1 | 341687-342199 | 513 | + | atypical fimbria lipoprotein | - |
| 48 | safB | YP_005180225.1 | 342307-343020 | 714 | + | atypical fimbria chaperone | Virulence |
| 49 | safC | YP_005180226.1 | 343044-345554 | 2511 | + | atypical fimbria outer membrane usher | Virulence |
| 50 | safD | YP_005180227.1 | 345576-346046 | 471 | + | fimbrial structural subunit | - |
| 51 | NA | YP_005180228.1 | 346452-347273 | 822 | + | hypothetical protein | Virulence |
| 52 | sinR | YP_005180229.1 | 348088-349035 | 948 | + | LysR family transcriptional regulator | - |
| 53 | NA | YP_005180230.1 | 349152-349367 | 216 | + | hypothetical protein | - |
| 54 | pagN | YP_005180231.1 | 349371-350090 | 720 | - | outer membrane adhesin | - |
| 55 | sciZ | YP_005180232.1 | 350421-350828 | 408 | - | secreted protein | - |