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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella sonnei 53G (NC_016822) Location : 535629 - 551571 bp Size : 15943 bp GC content : 50.8 % GC bias (=GCregion - GCgenome) : -0.2 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_005455113.1 | 535629-536132 | 504 | - | IS1 ORF | - |
2 | NA | YP_005455114.1 | 536051-536326 | 276 | - | IS1 repressor protein InsA | - |
3 | NA | YP_005455115.1 | 536355-537242 | 888 | - | putative uracil/xanthine transporter | - |
4 | NA | YP_005455116.1 | 537299-538399 | 1101 | - | allantoinase | - |
5 | NA | YP_005455117.1 | 538396-539247 | 852 | - | hydroxypyruvate isomerase | - |
6 | NA | YP_005455118.1 | 539260-539418 | 159 | - | glyoxylate carboligase | - |
7 | NA | YP_005455119.1 | 539492-539767 | 276 | + | IS1 repressor protein InsA | - |
8 | NA | YP_005455120.1 | 539686-540189 | 504 | + | IS1 ORF | - |
9 | NA | YP_005455121.1 | 540237-540500 | 264 | + | outer membrane usher protein FimD | - |
10 | NA | YP_005455122.1 | 540458-542011 | 1554 | + | outer membrane usher protein FimD | - |
11 | fimH | YP_005455123.1 | 542024-543031 | 1008 | + | fimbrial-like adhesin | Virulence |
12 | NA | YP_005455124.1 | 543042-543557 | 516 | + | fimbrial-like adhesin protein SfmF | Virulence |
13 | NA | YP_005455125.1 | 543560-544144 | 585 | - | transcriptional regulator FimZ | Virulence |
14 | NA | YP_005455126.1 | 544164-544667 | 504 | - | IS1 ORF | - |
15 | NA | YP_005455127.1 | 544586-544861 | 276 | - | IS1 repressor protein InsA | - |
16 | tRNA-Arg | - | 545212-545288 | 77 | + | tRNA-Arg | - |
17 | NA | YP_005455128.1 | 545333-546094 | 762 | - | envelope protein | - |
18 | NA | YP_005455129.1 | 546277-547167 | 891 | - | hypothetical protein | - |
19 | NA | YP_005455130.1 | 547168-550140 | 2973 | - | bacteriophage N4 receptor, outer membrane subunit | - |
20 | nfrB | YP_005455131.1 | 550127-550801 | 675 | - | bacteriophage N4 adsorption protein B | - |
21 | NA | YP_005455132.1 | 550874-551377 | 504 | - | IS1 ORF | - |
22 | NA | YP_005455133.1 | 551296-551571 | 276 | - | IS1 repressor protein InsA | - |