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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella sonnei 53G (NC_016822) Location : 4734115 - 4745276 bp Size : 11162 bp GC content : 48.0 % GC bias (=GCregion - GCgenome) : -3.02 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_005459458.1 | 4734115-4734828 | 714 | - | IS600 ORF2 | - |
2 | NA | YP_005459459.1 | 4734969-4735271 | 303 | - | IS600 orf1 | - |
3 | NA | YP_005459460.1 | 4735328-4736182 | 855 | - | lysine decarboxylase CadA | - |
4 | NA | YP_005459461.1 | 4736230-4737135 | 906 | - | IS2 transposase TnpB | - |
5 | NA | YP_005459462.1 | 4737093-4737458 | 366 | - | IS2 repressor TnpA | - |
6 | NA | YP_005459463.1 | 4737534-4738562 | 1029 | - | lysine decarboxylase CadA | - |
7 | cadB | YP_005459464.1 | 4738642-4738989 | 348 | - | lysine/cadaverine antiporter | - |
8 | NA | YP_005459465.1 | 4739101-4739403 | 303 | + | IS600 orf1 | - |
9 | NA | YP_005459466.1 | 4739544-4740257 | 714 | + | IS600 ORF2 | - |
10 | NA | YP_005459467.1 | 4740344-4741690 | 1347 | + | IS4 orf | - |
11 | cadB | YP_005459468.1 | 4741687-4742682 | 996 | - | lysine/cadaverine antiporter | Virulence |
12 | NA | YP_005459469.1 | 4744871-4745089 | 219 | + | hypothetical protein | - |
13 | tRNA-Phe | - | 4745201-4745276 | 76 | - | tRNA-Phe | - |