PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Salmonella enterica D23580 (NC_016854)
Location : 2903666 - 2918754 bp
Size : 15089 bp
GC content : 52.8 %
GC bias (=GCregion - GCgenome) : 0.64 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_005233762.1 2903666-2903965 300 + IS3 transposase-
2NA YP_005233763.1 2903962-2904828 867 + putative IS3 transposase orfB-
3NA YP_005233764.1 2905608-2906147 540 - repressor of phase 1 flagellin gene-
4NA YP_005233765.1 2906215-2907735 1521 - flagellin-
5NA YP_005233766.1 2907827-2908399 573 + DNA-invertase hin-
6NA YP_005233767.1 2909362-2910477 1116 + putative glycosyltransferaseVirulence
7NA YP_005233768.1 2910558-2914211 3654 + putative ABC transporter proteinVirulence
8NA YP_005233769.1 2914321-2915565 1245 + putative ferric enterochelin esteraseVirulence
9NA YP_005233770.1 2915597-2916532 936 + hypothetical proteinVirulence
10NA YP_005233771.1 2916574-2918754 2181 - TonB-dependent outer membrane siderophore receptor proteinVirulence