PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Salmonella enterica ST4/74 (NC_016857)
Location : 294819 - 332508 bp
Size : 37690 bp
GC content : 53.7 %
GC bias (=GCregion - GCgenome) : 1.51 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Asp - 294819-294895 77 + tRNA-Asp-
2dkgB YP_005241199.1 295060-295863 804 + 2,5-didehydrogluconate reductase-
3yafC YP_005241200.1 295884-296798 915 - putative transcriptional regulator-
4NA YP_005241201.1 296891-298078 1188 + putative drug efflux protein-
5yafD YP_005241202.1 298210-299010 801 + protein YafD-
6yafE YP_005241203.1 299088-299858 771 + putative methyltransferase-
7mltD YP_005241204.1 299914-301281 1368 - membrane-bound lytic murein transglycosylase D-
8NA YP_005241205.1 301353-302108 756 - putative periplasmic fimbrial chaperone-
9yafS YP_005241206.1 302143-302865 723 + putative SAM-dependent methyltransferase-
10rnhA YP_005241207.1 302862-303329 468 - ribonuclease H-
11dnaQ YP_005241208.1 303384-304124 741 + DNA polymerase III subunit epsilon-
12tRNA-Asp - 304258-304334 77 + tRNA-Asp-
13NA YP_005241209.1 304656-305711 1056 - putative cytoplasmic protein-
14NA YP_005241210.1 305722-306717 996 - putative cytoplasmic protein-
15vasA YP_005241211.1 306714-308597 1884 - type VI secretion proteinVirulence
16NA YP_005241212.1 308613-309107 495 - putative cytoplasmic protein-
17sciE YP_005241213.1 309104-309943 840 - SciE protein-
18NA YP_005241214.1 309915-310817 903 - putative cytoplasmic protein-
19NA YP_005241215.1 311185-313824 2640 + putative chaperone ATPaseVirulence
20NA YP_005241216.1 313924-314466 543 + putative cytoplasmic proteinVirulence
21NA YP_005241217.1 314490-315983 1494 + SciI proteinVirulence
22NA YP_005241218.1 316046-316156 111 + invasol SirA-
23NA YP_005241219.1 316169-316615 447 + putative cytoplasmic protein-
24NA YP_005241220.1 316869-317354 486 + hypothetical proteinVirulence
25NA YP_005241221.1 317659-318144 486 + putative cytoplasmic protein-
26NA YP_005241222.1 318129-318512 384 + hypothetical protein-
27NA YP_005241223.1 318655-319140 486 + putative cytoplasmic proteinVirulence
28NA YP_005241224.1 319207-319743 537 + putative outer membrane lipoprotein-
29NA YP_005241225.1 319747-321090 1344 + hypothetical protein-
30NA YP_005241226.1 321087-322391 1305 + Putative outer membrane protein, OmpA family-
31NA YP_005241227.1 322396-323169 774 + putative inner membrane protein-
32sciR YP_005241228.1 323360-323803 444 + SciR protein-
33sciS YP_005241229.1 323837-327706 3870 + SciS protein-
34NA YP_005241230.1 327706-328494 789 + putative cytoplasmic protein-
35NA YP_005241231.1 328491-328907 417 + hypothetical protein-
36NA YP_005241232.1 328931-329452 522 + putative cytoplasmic protein-
37NA YP_005241233.1 329849-332038 2190 + Rhs-family protein-
38NA YP_005241234.1 332062-332508 447 + hypothetical protein-


tRNA-Asp tRNA-Asp