PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Salmonella enterica UK-1 (NC_016863)
Location : 294826 - 336619 bp
Size : 41794 bp
GC content : 54.4 %
GC bias (=GCregion - GCgenome) : 2.14 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Val - 294826-294899 74 + tRNA-Val-
2dkgB YP_005250818.1 295057-295860 804 + 2,5-diketo-D-gluconate reductase B-
3yafC YP_005250819.1 295881-296795 915 - putative transcriptional regulator-
4NA YP_005250820.1 296900-298075 1176 + putative drug efflux protein-
5yafD YP_005250821.1 298228-299007 780 + hypothetical protein-
6yafE YP_005250822.1 299085-299855 771 + putative methyltransferase-
7mltD YP_005250823.1 299911-301278 1368 - membrane-bound lytic murein transglycosylase D-
8gloB YP_005250824.1 301350-302105 756 - hydroxyacylglutathione hydrolase-
9yafS YP_005250825.1 302140-302862 723 + putative SAM-dependent methyltransferase-
10rnhA YP_005250826.1 302859-303326 468 - ribonuclease H-
11dnaQ YP_005250827.1 303390-304121 732 + DNA polymerase III subunit epsilon-
12tRNA-Sec - 304265-304338 74 + tRNA-Sec-
13NA YP_005250828.1 304654-305709 1056 - putative cytoplasmic protein-
14NA YP_005250829.1 305720-306715 996 - putative cytoplasmic protein-
15NA YP_005250830.1 306712-308595 1884 - putative cytoplasmic proteinVirulence
16NA YP_005250831.1 308611-309105 495 - putative cytoplasmic protein-
17NA YP_005250832.1 309102-309926 825 - putative cytoplasmic protein-
18NA YP_005250833.1 309913-310815 903 - putative cytoplasmic protein-
19NA YP_005250834.1 311183-313822 2640 + putative chaperone ATPaseVirulence
20NA YP_005250835.1 313922-314464 543 + putative cytoplasmic proteinVirulence
21NA YP_005250836.1 314488-315981 1494 + putative cytoplasmic proteinVirulence
22NA YP_005250837.1 316044-316154 111 + invasol SirA-
23NA YP_005250838.1 316281-316613 333 + putative cytoplasmic protein-
24NA YP_005250839.1 316867-317352 486 + putative cytoplasmic proteinVirulence
25NA YP_005250840.1 317657-318142 486 + putative cytoplasmic protein-
26NA YP_005250841.1 318127-318510 384 + hypothetical protein-
27NA YP_005250842.1 318653-319138 486 + putative cytoplasmic proteinVirulence
28NA YP_005250843.1 319205-319741 537 + putative outer membrane lipoprotein-
29NA YP_005250844.1 319745-321088 1344 + putative cytoplasmic protein-
30NA YP_005250845.1 321085-322389 1305 + hypothetical protein-
31NA YP_005250846.1 322394-323167 774 + putative inner membrane protein-
32NA YP_005250847.1 323370-323801 432 + putative Shiga-like toxin A subunit-
33NA YP_005250848.1 323835-327704 3870 + putative inner membrane protein-
34NA YP_005250849.1 327704-328492 789 + putative cytoplasmic protein-
35NA YP_005250850.1 328489-328905 417 + hypothetical protein-
36NA YP_005250851.1 328929-329450 522 + putative cytoplasmic protein-
37NA YP_005250852.1 329847-332036 2190 + putative cytoplasmic protein-
38NA YP_005250853.1 332060-332506 447 + putative cytoplasmic protein-
39NA YP_005250854.1 332525-336619 4095 + putative RHS-like protein-


tRNA-Val tRNA-Sec