PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pestis D106004 (NC_017154)
Location : 3279541 - 3292913 bp
Size : 13373 bp
GC content : 45.8 %
GC bias (=GCregion - GCgenome) : -1.79 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_005505783.1 3279541-3280011 471 - hypothetical proteinVirulence
2NA YP_005505784.1 3280170-3280778 609 - fimbrial protein-
3NA YP_005505785.1 3280763-3281920 1158 - outer membrane fimbrial usher porin-
4NA YP_005505786.1 3281978-3283186 1209 + transposase-
5NA YP_005505787.1 3283208-3284587 1380 - hypothetical protein-
6NA YP_005505788.1 3284886-3285647 762 - pili chaperone protein-
7NA YP_005505789.1 3285804-3286349 546 - frimbrial protein-
8clpB YP_005505790.1 3286550-3289105 2556 - putative Clp ATPaseVirulence
9NA YP_005505791.1 3290053-3291888 1836 + hypothetical proteinVirulence
10NA YP_005505792.1 3291888-3292913 1026 + hypothetical protein-