PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pestis A1122 (NC_017168)
Location : 1722801 - 1743383 bp
Size : 20583 bp
GC content : 45.2 %
GC bias (=GCregion - GCgenome) : -2.41 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_005521233.1 1722801-1725659 2859 - putative insecticidal toxinVirulence
2NA YP_005521234.1 1725684-1728515 2832 - toxin subunitVirulence
3NA YP_005521235.1 1728716-1729084 369 - hypothetical protein-
4NA YP_005521236.1 1729072-1729473 402 - hypothetical protein-
5NA YP_005521237.1 1729486-1729788 303 - putative phage-like protein-
6NA YP_005521238.1 1729922-1734412 4491 - insecticidal toxin complexVirulence
7NA YP_005521239.1 1738102-1740603 2502 - putative insecticial toxin-
8NA YP_005521240.1 1740544-1740678 135 + hypothetical protein-
9NA YP_005521241.1 1740839-1741705 867 - LysR family transcriptional regulator-
10NA YP_005521242.1 1741966-1742877 912 - transcriptional regulator-
11NA YP_005521243.1 1743180-1743383 204 + efflux system membrane protein-


PI: Yer.3tccC tccC - - - tcaC tcaR2 tcaR1 - PI: Pho.1TccC2 TccC3 TccC4 TccC5 TccC3 TccC4 TccC2 TccC5 tchA tcdB1 tcdB2

• PAIs homologous to this region

tcd island (Photorhabdus luminescens W14)
tc-PAIYe (Yersinia enterocolitica W22703)