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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella flexneri 2002017 (NC_017328) Location : 3092253 - 3163972 bp Size : 71720 bp GC content : 49.5 % GC bias (=GCregion - GCgenome) : -1.34 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | tRNA-Phe | - | 3092253-3092325 | 73 | + | tRNA-Phe | - |
2 | NA | YP_005728584.1 | 3092526-3093788 | 1263 | + | Site-specific recombinase, phage integrase family protein | - |
3 | NA | YP_005728585.1 | 3094241-3097756 | 3516 | + | putative superfamily I DNA helicase | Virulence |
4 | NA | YP_005728586.1 | 3098096-3098461 | 366 | + | putative transposase | - |
5 | NA | YP_005728587.1 | 3099066-3099866 | 801 | + | hypothetical protein | Virulence |
6 | NA | YP_005728588.1 | 3100227-3104084 | 3858 | + | Serine protease | Virulence |
7 | NA | YP_005728589.1 | 3104131-3104871 | 741 | + | hypothetical protein | Virulence |
8 | NA | YP_005728590.1 | 3105114-3105521 | 408 | - | putative transposase | - |
9 | NA | YP_005728591.1 | 3105587-3106093 | 507 | + | putative transposase | - |
10 | NA | YP_005728592.1 | 3106180-3107094 | 915 | + | putative transposase | - |
11 | NA | YP_005728593.1 | 3107157-3107375 | 219 | + | IS1414, transposase | - |
12 | NA | YP_005728594.1 | 3107526-3111644 | 4119 | - | Serine protease pic precursor | Virulence |
13 | NA | YP_005728595.1 | 3109344-3109529 | 186 | + | Toxin subunit Set1B | Virulence |
14 | NA | YP_005728596.1 | 3109533-3110066 | 534 | + | Toxin subunit Set1A | Virulence |
15 | NA | YP_005728597.1 | 3111809-3112195 | 387 | - | IS629 ORF2 | - |
16 | NA | YP_005728598.1 | 3112372-3113646 | 1275 | - | Reverse transcriptase-like protein | Virulence |
17 | NA | YP_005728599.1 | 3113852-3114277 | 426 | + | hypothetical protein | - |
18 | NA | YP_005728600.1 | 3114312-3114563 | 252 | + | hypothetical protein | Virulence |
19 | NA | YP_005728601.1 | 3114490-3114969 | 480 | - | IS629 ORF2 | - |
20 | NA | YP_005728602.1 | 3114969-3115295 | 327 | - | IS629 orfA | - |
21 | NA | YP_005728603.1 | 3115578-3116003 | 426 | - | hypothetical protein | Virulence |
22 | NA | YP_005728604.1 | 3116000-3116383 | 384 | - | hypothetical protein | Virulence |
23 | NA | YP_005728605.1 | 3117304-3117663 | 360 | + | IS911 orfA | - |
24 | NA | YP_005728606.1 | 3118008-3118607 | 600 | - | hypothetical protein | Virulence |
25 | NA | YP_005728607.1 | 3119324-3119689 | 366 | + | IS2 ORF1 | - |
26 | NA | YP_005728608.1 | 3119696-3120124 | 429 | - | Insertion element IS2 protein | - |
27 | NA | YP_005728609.1 | 3119714-3120553 | 840 | + | IS2 orfB | - |
28 | NA | YP_005728610.1 | 3121236-3122150 | 915 | + | hypothetical protein | Virulence |
29 | NA | YP_005728611.1 | 3122412-3122618 | 207 | + | Regulator of excision | Virulence |
30 | NA | YP_005728612.1 | 3122704-3123276 | 573 | + | hypothetical protein | Virulence |
31 | NA | YP_005728613.1 | 3123278-3123562 | 285 | - | hypothetical protein | - |
32 | NA | YP_005728614.1 | 3123512-3123676 | 165 | + | Iso-IS1 ORF2 | - |
33 | NA | YP_005728615.1 | 3124845-3125819 | 975 | + | hypothetical protein | Virulence |
34 | NA | YP_005728616.1 | 3125975-3126847 | 873 | + | putative GTPase | Virulence |
35 | flu | YP_005728617.1 | 3127175-3130303 | 3129 | + | Outer membrane fluffing protein | Virulence |
36 | NA | YP_005728618.1 | 3130424-3132940 | 2517 | + | hypothetical protein | Virulence |
37 | NA | YP_005728619.1 | 3133016-3133471 | 456 | + | hypothetical protein | Virulence |
38 | NA | YP_005728620.1 | 3133489-3133617 | 129 | + | hypothetical protein | - |
39 | NA | YP_005728621.1 | 3133590-3133778 | 189 | - | hypothetical protein | - |
40 | NA | YP_005728622.1 | 3133882-3134700 | 819 | + | hypothetical protein | Virulence |
41 | NA | YP_005728623.1 | 3134970-3135515 | 546 | + | hypothetical protein | Virulence |
42 | NA | YP_005728624.1 | 3135516-3136007 | 492 | + | putative RADC family DNA repair protein | Virulence |
43 | NA | YP_005728625.1 | 3136094-3136315 | 222 | + | YeeT | Virulence |
44 | NA | YP_005728626.1 | 3136395-3136772 | 378 | + | Intergenic-region protein | Virulence |
45 | NA | YP_005728627.1 | 3136819-3137196 | 378 | + | hypothetical protein | Virulence |
46 | NA | YP_005728628.1 | 3137193-3137681 | 489 | + | hypothetical protein | Virulence |
47 | NA | YP_005728629.1 | 3137701-3137898 | 198 | + | hypothetical protein | Virulence |
48 | NA | YP_005728630.1 | 3137983-3138825 | 843 | + | hypothetical protein | Virulence |
49 | NA | YP_005728631.1 | 3139557-3139847 | 291 | + | hypothetical protein | - |
50 | NA | YP_005728632.1 | 3140241-3140549 | 309 | + | putative transposase | - |
51 | NA | YP_005728633.1 | 3140546-3141412 | 867 | + | IS3 orfB | - |
52 | NA | YP_005728634.1 | 3141516-3141983 | 468 | - | putative tight adherance operon protein | - |
53 | NA | YP_005728635.1 | 3142049-3142288 | 240 | - | hypothetical protein | - |
54 | NA | YP_005728636.1 | 3142423-3143028 | 606 | - | Membrane protein | - |
55 | NA | - | 3143146-3143840 | 695 | - | - | - |
56 | NA | YP_005728637.1 | 3143760-3144023 | 264 | + | putative IS1 encoded protein | - |
57 | glcA | YP_005728638.1 | 3145297-3146883 | 1587 | - | putative permease | - |
58 | glcB | YP_005728639.1 | 3147238-3149409 | 2172 | - | Malate synthase G | - |
59 | glcG | YP_005728640.1 | 3149431-3149835 | 405 | - | hypothetical protein | - |
60 | glcF | - | 3149840-3152123 | 2284 | - | - | - |
61 | glcD | - | 3152123-3153622 | 1500 | - | - | - |
62 | glcC | YP_005728641.1 | 3153873-3154643 | 771 | + | Transcriptional activator for glc operon | - |
63 | NA | - | 3154767-3155881 | 1115 | - | - | - |
64 | NA | YP_005728642.1 | 3156312-3158000 | 1689 | + | putative saframycin Mx1 synthetase B | - |
65 | NA | YP_005728643.1 | 3158015-3158911 | 897 | + | NAD-dependent epimerase/dehydratase | - |
66 | NA | YP_005728644.1 | 3158944-3159192 | 249 | + | putative acyl carrier protein | - |
67 | NA | YP_005728645.1 | 3159192-3159542 | 351 | + | putative class II aminotransferase | - |
68 | NA | YP_005728646.1 | 3159575-3160363 | 789 | + | putative 7-keto-8-aminopelargonate synthetase-like enzyme | - |
69 | NA | YP_005728647.1 | 3160399-3161478 | 1080 | - | putative permease, YjgP/YjgQ family | - |
70 | NA | YP_005728648.1 | 3161475-3162545 | 1071 | - | putative permease | - |
71 | NA | YP_005728649.1 | 3162576-3163136 | 561 | - | putative transcriptional regulator | - |
72 | NA | YP_005728650.1 | 3163148-3163972 | 825 | - | putative FOG: TPR repeat protein | - |