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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella flexneri 2002017 (NC_017328) Location : 3838604 - 3867206 bp Size : 28603 bp GC content : 48.4 % GC bias (=GCregion - GCgenome) : -2.45 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | tRNA-Ser | - | 3838604-3838694 | 91 | + | tRNA-Ser | - |
2 | NA | YP_005729297.1 | 3838970-3840181 | 1212 | + | Sai integrase | - |
3 | NA | YP_005729298.1 | 3840593-3841636 | 1044 | + | ShiA-like protein | Virulence |
4 | NA | YP_005729299.1 | 3842151-3842612 | 462 | + | hypothetical protein | Virulence |
5 | NA | YP_005729300.1 | 3842609-3843316 | 708 | - | TnpA protein | - |
6 | NA | YP_005729301.1 | 3843461-3843760 | 300 | - | putative transposase | - |
7 | NA | YP_005729302.1 | 3843945-3844463 | 519 | + | ShiC | Virulence |
8 | NA | - | 3844544-3845192 | 649 | - | - | - |
9 | NA | YP_005729303.1 | 3845428-3845754 | 327 | - | IS629 orfA | - |
10 | NA | YP_005729304.1 | 3846424-3846696 | 273 | - | hypothetical protein | Virulence |
11 | NA | YP_005729305.1 | 3846757-3847662 | 906 | - | IS2 ORF2 | - |
12 | NA | YP_005729306.1 | 3847186-3847617 | 432 | + | putative IS2 ORF | - |
13 | NA | YP_005729307.1 | 3847620-3847985 | 366 | - | IS2 ORF1 | - |
14 | NA | YP_005729308.1 | 3848352-3848546 | 195 | + | hypothetical protein | Virulence |
15 | NA | YP_005729309.1 | 3849304-3849702 | 399 | + | ShiD | Virulence |
16 | NA | YP_005729310.1 | 3850223-3850726 | 504 | - | IS1 orfB | - |
17 | NA | YP_005729311.1 | 3850819-3851772 | 954 | + | IS600 ORF2 | Virulence |
18 | NA | YP_005729312.1 | 3851722-3852915 | 1194 | - | ShiF | Virulence |
19 | NA | YP_005729313.1 | 3852985-3854775 | 1791 | + | putative Siderophore synthetase component | Virulence |
20 | NA | YP_005729314.1 | 3854776-3855681 | 906 | + | IucB | Virulence |
21 | NA | YP_005729315.1 | 3855722-3857464 | 1743 | + | Siderophore biosynthesis protein | Virulence |
22 | NA | YP_005729316.1 | 3857461-3858798 | 1338 | + | Lysine:N6-hydroxylase | Virulence |
23 | NA | YP_005729317.1 | 3858801-3860999 | 2199 | + | putative ferric siderophore receptor | Virulence |
24 | NA | YP_005729318.1 | 3861550-3861678 | 129 | - | hypothetical protein | Virulence |
25 | NA | YP_005729319.1 | 3861920-3862678 | 759 | + | serine protease | Virulence |
26 | NA | YP_005729320.1 | 3862649-3863554 | 906 | - | IS2 ORF2 | - |
27 | NA | YP_005729321.1 | 3863078-3863509 | 432 | + | putative IS2 ORF | - |
28 | NA | YP_005729322.1 | 3863512-3863877 | 366 | - | IS2 ORF1 | - |
29 | NA | YP_005729323.1 | 3864023-3866545 | 2523 | + | putative long polar fimbriae | - |
30 | NA | YP_005729324.1 | 3866703-3867206 | 504 | - | IS1 ORF2 | - |