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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori Cuz20 (NC_017358) Location : 553835 - 601609 bp Size : 47775 bp GC content : 36.1 % GC bias (=GCregion - GCgenome) : -2.75 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_005766634.1 | 553835-554005 | 171 | + | urease-enhancing factor | - |
2 | NA | YP_005766635.1 | 554029-554127 | 99 | + | hypothetical protein | - |
3 | NA | YP_005766636.1 | 554255-555700 | 1446 | - | glutamine synthetase | Virulence |
4 | rplI | YP_005766637.1 | 557410-557859 | 450 | + | 50S ribosomal protein L9 | - |
5 | NA | YP_005766638.1 | 557863-558405 | 543 | + | ATP-dependent protease peptidase subunit | - |
6 | hslU | YP_005766639.1 | 558405-559736 | 1332 | + | ATP-dependent protease ATP-binding subunit HslU | - |
7 | era | YP_005766640.1 | 559736-560641 | 906 | + | GTP-binding protein Era | - |
8 | NA | YP_005766641.1 | 560638-561630 | 993 | + | hypothetical protein | - |
9 | NA | YP_005766642.1 | 561700-562530 | 831 | - | hypothetical protein | - |
10 | NA | YP_005766643.1 | 562761-563108 | 348 | + | cag pathogenicity island protein (cag zeta, cag1) | Virulence |
11 | NA | YP_005766644.1 | 563124-563321 | 198 | + | cag pathogenicity island protein (cag theta, cag2) | Virulence |
12 | NA | YP_005766645.1 | 563336-564781 | 1446 | + | cag pathogenicity island protein (cag delta, cag3) | Virulence |
13 | NA | YP_005766646.1 | 564791-565300 | 510 | + | cag pathogenicity island protein (cag4) | Virulence |
14 | NA | YP_005766647.1 | 565432-567678 | 2247 | - | cag pathogenicity island protein (cag beta, cag5) | Virulence |
15 | NA | YP_005766648.1 | 567687-568679 | 993 | - | cag pathogenicity island protein cag alpha | Virulence |
16 | NA | YP_005766649.1 | 568684-569283 | 600 | - | cag pathogenicity island protein (cagZ, cag6) | Virulence |
17 | NA | YP_005766650.1 | 569296-569430 | 135 | - | hypothetical protein | - |
18 | NA | YP_005766651.1 | 569420-571804 | 2385 | - | cag pathogenicity island protein (cagY, cag7) | Virulence |
19 | NA | YP_005766652.1 | 574504-576072 | 1569 | - | cag pathogenicity island protein (cagX, cag8) | Virulence |
20 | NA | YP_005766653.1 | 576125-577732 | 1608 | - | cag pathogenicity island protein (cagW, cag9) | Virulence |
21 | NA | YP_005766654.1 | 577737-578495 | 759 | - | cag pathogenicity island protein V | Virulence |
22 | NA | YP_005766655.1 | 578771-579418 | 648 | + | cag pathogenicity island protein (cagU, cag11) | Virulence |
23 | NA | YP_005766656.1 | 579434-580276 | 843 | + | CAG pathogenicity island protein 12 | Virulence |
24 | NA | YP_005766657.1 | 580478-581077 | 600 | - | CAG pathogenicity island protein 13 | Virulence |
25 | NA | YP_005766658.1 | 581511-581723 | 213 | - | hypothetical protein | - |
26 | NA | YP_005766659.1 | 581783-581962 | 180 | + | hypothetical protein | - |
27 | NA | YP_005766660.1 | 581991-582296 | 306 | + | cag pathogenicity island protein (cagQ, cag14) | - |
28 | NA | YP_005766661.1 | 582849-582944 | 96 | - | hypothetical protein | - |
29 | NA | YP_005766662.1 | 584033-585163 | 1131 | + | cag pathogenicity island protein (cagM, cag16) | Virulence |
30 | NA | YP_005766663.1 | 585178-586098 | 921 | + | cag pathogenicity island protein (cagN, cag17) | Virulence |
31 | NA | YP_005766664.1 | 586181-586888 | 708 | - | cag pathogenicity island protein (cagL, cag18) | Virulence |
32 | NA | YP_005766665.1 | 586885-588024 | 1140 | - | cag pathogenicity island protein (cagI, cag19) | Virulence |
33 | NA | YP_005766666.1 | 588035-589027 | 993 | - | cag pathogenicity island protein H | Virulence |
34 | NA | YP_005766667.1 | 589149-589580 | 432 | - | cag pathogenicity island protein (cagG, cag21) | Virulence |
35 | NA | YP_005766668.1 | 589635-590441 | 807 | - | cag pathogenicity island protein (cagF, cag22) | Virulence |
36 | NA | YP_005766669.1 | 590443-593394 | 2952 | - | cag pathogenicity island protein (cagE, cag23) | Virulence |
37 | NA | YP_005766670.1 | 593403-594026 | 624 | - | cag pathogenicity island protein (cagD, cag24) | Virulence |
38 | NA | YP_005766671.1 | 594028-594375 | 348 | - | cag pathogenicity island protein (cagC, cag25) | Virulence |
39 | NA | YP_005766672.1 | 594703-595059 | 357 | + | ISHp608 OrfA | - |
40 | NA | YP_005766673.1 | 595022-596140 | 1119 | + | ISHp608 OrfB | - |
41 | NA | YP_005766674.1 | 596358-596585 | 228 | - | cag pathogenicity island protein (cagB) | Virulence |
42 | NA | YP_005766675.1 | 596990-600400 | 3411 | + | cag pathogenicity island protein (cagA, cag26) | Virulence |
43 | NA | YP_005766676.1 | 600369-600515 | 147 | - | hypothetical protein | - |
44 | NA | YP_005766677.1 | 600842-601609 | 768 | - | glutamate racemase | - |