Home PAIs REIs Genomes Search Links |
|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori SouthAfrica7 (NC_017361) Location : 1527440 - 1568187 bp Size : 40748 bp GC content : 33.5 % GC bias (=GCregion - GCgenome) : -4.97 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_005772062.1 | 1527440-1528219 | 780 | + | hypothetical protein | - |
2 | NA | YP_005772063.1 | 1528239-1528532 | 294 | + | hypothetical protein | - |
3 | NA | YP_005772064.1 | 1528539-1530065 | 1527 | + | hypothetical protein | - |
4 | NA | YP_005772065.1 | 1530062-1530364 | 303 | + | hypothetical protein | Virulence |
5 | NA | YP_005772066.1 | 1530365-1530631 | 267 | + | hypothetical protein | Virulence |
6 | NA | YP_005772067.1 | 1530624-1533047 | 2424 | + | VirB4-like protein | - |
7 | NA | YP_005772068.1 | 1533050-1533940 | 891 | + | DNA topoisomerase I (topA) | - |
8 | NA | YP_005772069.1 | 1533988-1534404 | 417 | - | IS200 insertion sequence from SARA17 | - |
9 | NA | YP_005772070.1 | 1534441-1535769 | 1329 | + | IS606 transposase | - |
10 | NA | YP_005772071.1 | 1535817-1537052 | 1236 | + | DNA topoisomerase I (topA) | - |
11 | NA | YP_005772072.1 | 1537169-1538332 | 1164 | + | VirB8 type IV secretion protein | Virulence |
12 | NA | YP_005772073.1 | 1538332-1539864 | 1533 | + | VirB9 type IV secretion protein | Virulence |
13 | NA | YP_005772074.1 | 1539861-1541123 | 1263 | + | VirB10 type IV secretion protein | Virulence |
14 | NA | YP_005772075.1 | 1541193-1541486 | 294 | + | hypothetical protein | - |
15 | NA | YP_005772076.1 | 1541479-1541799 | 321 | + | hypothetical protein | - |
16 | NA | YP_005772077.1 | 1541802-1542104 | 303 | + | hypothetical protein | - |
17 | NA | YP_005772078.1 | 1542101-1543072 | 972 | + | type IV secretion system ATPase (virB11-like) protein | Virulence |
18 | NA | YP_005772079.1 | 1543069-1543542 | 474 | + | hypothetical protein | - |
19 | NA | YP_005772080.1 | 1543544-1543801 | 258 | + | hypothetical protein | - |
20 | NA | YP_005772081.1 | 1543901-1546033 | 2133 | + | conjugal transfer protein (traG) | Virulence |
21 | NA | YP_005772082.1 | 1546254-1546550 | 297 | - | hypothetical protein | - |
22 | NA | YP_005772083.1 | 1546606-1546917 | 312 | - | hypothetical protein | - |
23 | NA | YP_005772084.1 | 1546885-1548873 | 1989 | + | hypothetical protein | - |
24 | NA | YP_005772085.1 | 1548900-1549169 | 270 | - | hypothetical protein | - |
25 | NA | YP_005772086.1 | 1549247-1549909 | 663 | - | PARA protein | - |
26 | NA | YP_005772087.1 | 1550176-1558584 | 8409 | - | hypothetical protein | - |
27 | NA | YP_005772088.1 | 1558781-1559788 | 1008 | + | hypothetical protein | - |
28 | NA | YP_005772089.1 | 1561161-1563356 | 2196 | + | hypothetical protein | - |
29 | NA | YP_005772090.1 | 1563366-1564766 | 1401 | + | hypothetical protein | - |
30 | NA | YP_005772091.1 | 1564818-1565096 | 279 | + | hypothetical protein | - |
31 | NA | YP_005772092.1 | 1565098-1566360 | 1263 | + | hypothetical protein | Virulence |
32 | NA | YP_005772093.1 | 1566433-1567116 | 684 | + | hypothetical protein | - |
33 | NA | YP_005772094.1 | 1567195-1568187 | 993 | - | integrase/recombinase XercD family protein | - |