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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori 2017 (NC_017374) Location : 487313 - 533257 bp Size : 45945 bp GC content : 36.4 % GC bias (=GCregion - GCgenome) : -2.88 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_005783476.1 | 487313-487501 | 189 | + | hypothetical protein | - |
2 | NA | YP_005783477.1 | 487540-487659 | 120 | + | hypothetical protein | - |
3 | glnA | YP_005783478.1 | 488237-489682 | 1446 | - | glutamine synthetase | Virulence |
4 | NA | YP_005783479.1 | 489820-490935 | 1116 | + | RloF like protein | - |
5 | NA | YP_005783480.1 | 490904-491893 | 990 | + | RloF like protein | - |
6 | rplI | YP_005783481.1 | 491956-492405 | 450 | + | 50S ribosomal protein L9 | - |
7 | hslV | YP_005783482.1 | 492409-492951 | 543 | + | ATP-dependent protease peptidase subunit | - |
8 | hslU | YP_005783483.1 | 492951-494282 | 1332 | + | ATP-dependent protease ATP binding subunit | - |
9 | NA | YP_005783484.1 | 494282-495187 | 906 | + | GTP-binding protein | - |
10 | NA | YP_005783485.1 | 495184-496176 | 993 | + | hypothetical protein | - |
11 | NA | YP_005783486.1 | 496258-497112 | 855 | - | hypothetical protein | - |
12 | tnpB1 | YP_005783487.1 | 497212-497343 | 132 | + | putative IS606 transposase | - |
13 | NA | YP_005783488.1 | 497264-497359 | 96 | + | hypothetical protein | - |
14 | cag1 | YP_005783489.1 | 497446-497793 | 348 | + | cag pathogenicity island protein | Virulence |
15 | cag2 | YP_005783490.1 | 497936-498595 | 660 | + | cag island protein | Virulence |
16 | cag3 | YP_005783491.1 | 498588-500033 | 1446 | + | cag pathogenicity island protein | Virulence |
17 | NA | YP_005783492.1 | 500043-500552 | 510 | + | cag island protein | Virulence |
18 | NA | YP_005783493.1 | 500833-500955 | 123 | - | hypothetical protein | - |
19 | virD4 | YP_005783494.1 | 501029-503275 | 2247 | - | Type IV secretion system protein | Virulence |
20 | virB11a | YP_005783495.1 | 503284-504276 | 993 | - | ATPase | Virulence |
21 | NA | YP_005783496.1 | 504281-504880 | 600 | - | cag pathogenicity island protein Z | Virulence |
22 | cag7a | YP_005783497.1 | 505016-506617 | 1602 | - | cag pathogenicity island protein | Virulence |
23 | cag7b | YP_005783498.1 | 506676-508076 | 1401 | - | cag pathogenicity island protein | Virulence |
24 | NA | YP_005783499.1 | 508091-509539 | 1449 | - | cag island protein | Virulence |
25 | cag9 | YP_005783500.1 | 509709-511316 | 1608 | - | cag pathogenicity island protein | Virulence |
26 | virB8 | YP_005783501.1 | 511321-512079 | 759 | - | Inner membrane protein | Virulence |
27 | cag11 | YP_005783502.1 | 512460-513116 | 657 | + | cag pathogenicity island protein | Virulence |
28 | cag12 | YP_005783503.1 | 513152-513994 | 843 | + | cag pathogenicity island protein | Virulence |
29 | NA | YP_005783504.1 | 514176-514775 | 600 | - | cag pathogenicity island protein | Virulence |
30 | cag14 | YP_005783505.1 | 515200-515403 | 204 | - | cag pathogenicity island protein | - |
31 | NA | YP_005783506.1 | 516593-516730 | 138 | + | hypothetical protein | - |
32 | NA | YP_005783507.1 | 516965-518095 | 1131 | + | cag island protein | Virulence |
33 | cag17 | YP_005783508.1 | 518110-519030 | 921 | + | cag pathogenicity island protein N | Virulence |
34 | cag18 | YP_005783509.1 | 519111-519770 | 660 | - | cag pathogenicity island protein | Virulence |
35 | NA | YP_005783510.1 | 519821-520894 | 1074 | - | cag pathogenicity island protein | Virulence |
36 | NA | YP_005783511.1 | 520977-521921 | 945 | - | cag island protein | Virulence |
37 | NA | YP_005783512.1 | 522105-522533 | 429 | - | cag island protein | Virulence |
38 | NA | YP_005783513.1 | 522588-523394 | 807 | - | cag pathogenicity island protein | Virulence |
39 | cag23 | YP_005783514.1 | 523396-526347 | 2952 | - | CAG pathogenicity island protein | Virulence |
40 | NA | YP_005783515.1 | 526356-526979 | 624 | - | cag island protein | Virulence |
41 | NA | YP_005783516.1 | 526981-527328 | 348 | - | cag pathogenicity island protein C | Virulence |
42 | NA | YP_005783517.1 | 527730-527864 | 135 | - | hypothetical protein | - |
43 | NA | YP_005783518.1 | 528135-531689 | 3555 | + | cag island protein | Virulence |
44 | NA | YP_005783519.1 | 532055-532330 | 276 | + | putative helicase | Virulence |
45 | NA | YP_005783520.1 | 532287-532400 | 114 | + | hypothetical protein | - |
46 | murI | YP_005783521.1 | 532490-533257 | 768 | - | glutamate racemase | - |