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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori Puno120 (NC_017378) Location : 492906 - 539918 bp Size : 47013 bp GC content : 36.2 % GC bias (=GCregion - GCgenome) : -2.74 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_005788172.1 | 492906-493076 | 171 | + | urease-enhancing factor | - |
2 | NA | YP_005788173.1 | 493091-493237 | 147 | + | hypothetical protein | - |
3 | NA | YP_005788174.1 | 493300-494745 | 1446 | - | glutamine synthetase | Virulence |
4 | NA | YP_005788175.1 | 494879-496912 | 2034 | + | hypothetical protein | - |
5 | rplI | YP_005788176.1 | 496975-497424 | 450 | + | 50S ribosomal protein L9 | - |
6 | NA | YP_005788177.1 | 497428-497970 | 543 | + | ATP-dependent protease subunit HslV | - |
7 | hslU | YP_005788178.1 | 497979-499301 | 1323 | + | ATP-dependent protease ATP-binding subunit HslU | - |
8 | era | YP_005788179.1 | 499301-500206 | 906 | + | GTPase Era | - |
9 | NA | YP_005788180.1 | 500203-501195 | 993 | + | hypothetical protein | - |
10 | NA | YP_005788181.1 | 501264-502049 | 786 | - | hypothetical protein | - |
11 | NA | YP_005788182.1 | 502024-502116 | 93 | - | hypothetical protein | - |
12 | NA | YP_005788183.1 | 502230-502577 | 348 | + | cag pathogenicity island protein (cag zeta, cag1) | Virulence |
13 | NA | YP_005788184.1 | 502806-504251 | 1446 | + | cag pathogenicity island protein (cag delta, cag3) | Virulence |
14 | NA | YP_005788185.1 | 504261-504770 | 510 | + | cag pathogenicity island protein (cag4) | Virulence |
15 | NA | YP_005788186.1 | 507143-508135 | 993 | - | cag pathogenicity island protein cag alpha | Virulence |
16 | NA | YP_005788187.1 | 508140-508739 | 600 | - | cag pathogenicity island protein (cagZ, cag6) | Virulence |
17 | NA | YP_005788188.1 | 508752-508886 | 135 | - | hypothetical protein | - |
18 | NA | YP_005788189.1 | 508876-514551 | 5676 | - | cag pathogenicity island protein (cag7) | Virulence |
19 | NA | YP_005788190.1 | 514566-516134 | 1569 | - | cag pathogenicity island protein (cagX, cag8) | Virulence |
20 | NA | YP_005788191.1 | 516187-517794 | 1608 | - | cag pathogenicity island protein W | Virulence |
21 | NA | YP_005788192.1 | 517799-518557 | 759 | - | cag pathogenicity island protein (cagV, cag10) | Virulence |
22 | NA | YP_005788193.1 | 518831-519478 | 648 | + | cag pathogenicity island protein (cagU, cag11) | Virulence |
23 | NA | YP_005788194.1 | 519494-520336 | 843 | + | CAG pathogenicity island protein T | Virulence |
24 | NA | YP_005788195.1 | 520538-521137 | 600 | - | CAG pathogenicity island protein S | Virulence |
25 | NA | YP_005788196.1 | 521471-521683 | 213 | - | hypothetical protein | - |
26 | NA | YP_005788197.1 | 521742-521936 | 195 | + | hypothetical protein | - |
27 | NA | YP_005788198.1 | 521948-522253 | 306 | + | cag pathogenicity island protein (cagQ, cag14) | Virulence |
28 | NA | YP_005788199.1 | 522310-522513 | 204 | + | hypothetical protein | - |
29 | NA | YP_005788200.1 | 524094-525224 | 1131 | + | cag pathogenicity island protein M | Virulence |
30 | NA | YP_005788201.1 | 525239-526150 | 912 | + | cag pathogenicity island protein (cagN, cag17) | Virulence |
31 | NA | YP_005788202.1 | 526233-526940 | 708 | - | cag pathogenicity island protein (cagL, cag18) | Virulence |
32 | NA | YP_005788203.1 | 526937-528076 | 1140 | - | cag pathogenicity island protein (cagI, cag19) | Virulence |
33 | NA | YP_005788204.1 | 528087-529199 | 1113 | - | cag pathogenicity island protein H | Virulence |
34 | NA | YP_005788205.1 | 529201-529632 | 432 | - | cag pathogenicity island protein (cagG, cag21) | Virulence |
35 | NA | YP_005788206.1 | 529687-530493 | 807 | - | cag pathogenicity island protein (cagF, cag22) | Virulence |
36 | NA | YP_005788207.1 | 533456-534079 | 624 | - | cag pathogenicity island protein (cagD, cag24) | Virulence |
37 | NA | YP_005788208.1 | 534081-534428 | 348 | - | cag pathogenicity island protein (cagC, cag25) | Virulence |
38 | NA | YP_005788209.1 | 534607-534834 | 228 | - | cag pathogenicity island protein (cagB) | Virulence |
39 | NA | YP_005788210.1 | 535240-538758 | 3519 | + | cag pathogenicity island protein (cagA, cag26) | Virulence |
40 | NA | YP_005788211.1 | 538939-539211 | 273 | + | hypothetical protein | - |
41 | NA | YP_005788212.1 | 539151-539918 | 768 | - | glutamate racemase | - |