Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli 042 (NC_017626) Location : 3429556 - 3495247 bp Size : 65692 bp GC content : 48.4 % GC bias (=GCregion - GCgenome) : -2.16 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_006097506.1 | 3429556-3430287 | 732 | - | hypothetical protein | Virulence |
2 | NA | YP_006097507.1 | 3430957-3431487 | 531 | + | putative DNA-binding protein | - |
3 | NA | YP_006097508.1 | 3432650-3433873 | 1224 | - | hypothetical protein | Virulence |
4 | NA | YP_006097509.1 | 3433974-3434858 | 885 | + | putative ATP/GTP-binding protein | Virulence |
5 | NA | YP_006097510.1 | 3435061-3435741 | 681 | + | putative DNA-binding protein | Virulence |
6 | NA | YP_006097511.1 | 3435784-3436566 | 783 | + | hypothetical protein | Virulence |
7 | NA | YP_006097512.1 | 3436572-3436805 | 234 | + | hypothetical protein | Virulence |
8 | NA | YP_006097513.1 | 3436895-3437713 | 819 | + | hypothetical protein | Virulence |
9 | NA | YP_006097514.1 | 3437804-3438289 | 486 | + | putative antirestriction protein | Virulence |
10 | NA | - | 3437857-3439501 | 1645 | - | - | - |
11 | NA | YP_006097515.1 | 3438290-3438781 | 492 | + | putative DNA repair protein | Virulence |
12 | NA | YP_006097516.1 | 3438844-3439065 | 222 | + | hypothetical protein | Virulence |
13 | NA | YP_006097517.1 | 3439145-3439522 | 378 | + | hypothetical protein | Virulence |
14 | NA | YP_006097518.1 | 3439569-3439946 | 378 | + | hypothetical protein | Virulence |
15 | NA | YP_006097519.1 | 3439943-3440431 | 489 | + | hypothetical protein | Virulence |
16 | NA | YP_006097520.1 | 3440443-3440640 | 198 | + | hypothetical protein | Virulence |
17 | NA | YP_006097521.1 | 3440725-3441567 | 843 | + | hypothetical protein | Virulence |
18 | NA | - | 3441678-3441699 | 22 | + | - | - |
19 | NA | YP_006097522.1 | 3441805-3442095 | 291 | - | hypothetical protein | - |
20 | kpsF | YP_006097523.1 | 3442891-3443874 | 984 | + | polysialic acid capsule expression protein | Virulence |
21 | kpsE | YP_006097524.1 | 3443946-3445094 | 1149 | + | capsule polysaccharide export protein | Virulence |
22 | kpsD | YP_006097525.1 | 3445115-3446794 | 1680 | + | polysialic acid transport protein | Virulence |
23 | kpsU | YP_006097526.1 | 3446804-3447544 | 741 | + | 3-deoxy-manno-octulosonate cytidylyltransferase | Virulence |
24 | kpsC | YP_006097527.1 | 3447541-3449568 | 2028 | + | capsule polysaccharide export protein | Virulence |
25 | kpsS | YP_006097528.1 | 3449603-3450850 | 1248 | + | capsule polysaccharide export protein | Virulence |
26 | NA | YP_006097529.1 | 3450959-3452419 | 1461 | - | putative capsule O-acetyl transferase | - |
27 | NA | YP_006097530.1 | 3452780-3456118 | 3339 | - | putative capsular polysaccharide modification protein | - |
28 | NA | YP_006097531.1 | 3456356-3457051 | 696 | - | putative capsular polysaccharide modification protein | - |
29 | kpsT | YP_006097532.1 | 3457137-3457808 | 672 | - | polysialic acid transport ATP-binding protein | Virulence |
30 | kpsM | YP_006097533.1 | 3457805-3458581 | 777 | - | polysialic acid transport permease protein | Virulence |
31 | NA | YP_006097534.1 | 3459409-3459594 | 186 | - | hypothetical protein | - |
32 | gspM | YP_006097535.1 | 3459637-3460173 | 537 | - | type II secretion system protein M | Virulence |
33 | gspL | YP_006097536.1 | 3460175-3461353 | 1179 | - | type II secretion system protein L | Virulence |
34 | gspK | YP_006097537.1 | 3461350-3462327 | 978 | - | type II secretion system protein K | Virulence |
35 | gspJ | YP_006097538.1 | 3462324-3462893 | 570 | - | type II secretion system protein J | Virulence |
36 | gspI | YP_006097539.1 | 3462926-3463297 | 372 | - | type II secretion system protein I | Virulence |
37 | gspH | YP_006097540.1 | 3463294-3463857 | 564 | - | type II secretion system protein H | Virulence |
38 | gspG | YP_006097541.1 | 3463861-3464316 | 456 | - | type II secretion system protein G | Virulence |
39 | gspF | YP_006097542.1 | 3464333-3465556 | 1224 | - | type II secretion system protein F | Virulence |
40 | gspE | YP_006097543.1 | 3465556-3467049 | 1494 | - | type II secretion system protein E | Virulence |
41 | gspD | YP_006097544.1 | 3467049-3469109 | 2061 | - | type II secretion system protein D | Virulence |
42 | gspC | YP_006097545.1 | 3469139-3470098 | 960 | - | type II secretion system protein C | Virulence |
43 | NA | YP_006097546.1 | 3470116-3470526 | 411 | - | type II secretion system lipoprotein | - |
44 | pppA | YP_006097547.1 | 3470592-3471401 | 810 | - | type II secretion system leader peptidase | - |
45 | acfD | YP_006097548.1 | 3471541-3476112 | 4572 | - | accessory colonization factor | Virulence |
46 | NA | YP_006097549.1 | 3476263-3476568 | 306 | + | hypothetical protein | - |
47 | glcA | YP_006097550.1 | 3476596-3478278 | 1683 | - | glycolate permease | - |
48 | glcB | YP_006097551.1 | 3478633-3480804 | 2172 | - | malate synthase G | - |
49 | glcG | YP_006097552.1 | 3480826-3481230 | 405 | - | hypothetical protein | - |
50 | glcF | YP_006097553.1 | 3481235-3482458 | 1224 | - | glycolate oxidase iron-sulfur subunit | - |
51 | glcE | YP_006097554.1 | 3482469-3483521 | 1053 | - | glycolate oxidase subunit | - |
52 | glcD | YP_006097555.1 | 3483521-3485020 | 1500 | - | glycolate oxidase subunit | - |
53 | glcC | YP_006097556.1 | 3485271-3486035 | 765 | + | glc operon transcriptional activator | - |
54 | NA | YP_006097557.1 | 3486042-3487184 | 1143 | - | hypothetical protein | - |
55 | NA | YP_006097558.1 | 3487555-3489276 | 1722 | + | AMP-binding protein | - |
56 | NA | YP_006097559.1 | 3489273-3490187 | 915 | + | hypothetical protein | - |
57 | NA | YP_006097560.1 | 3490219-3490467 | 249 | + | putative acyl carrier protein | - |
58 | NA | YP_006097561.1 | 3490467-3491639 | 1173 | + | putative aminotransferase | - |
59 | NA | YP_006097562.1 | 3491674-3492753 | 1080 | - | putative permease | - |
60 | NA | YP_006097563.1 | 3492750-3493820 | 1071 | - | putative permease | - |
61 | NA | YP_006097564.1 | 3493851-3494411 | 561 | - | hypothetical protein | - |
62 | NA | YP_006097565.1 | 3494423-3495247 | 825 | - | hypothetical protein | - |