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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli ABU 83972 (NC_017631) Location : 3362403 - 3457047 bp Size : 94645 bp GC content : 48.7 % GC bias (=GCregion - GCgenome) : -1.88 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_006107294.1 | 3362403-3362618 | 216 | - | hypothetical protein | Virulence |
2 | NA | YP_006107295.1 | 3362622-3362990 | 369 | - | hypothetical protein | Virulence |
3 | NA | YP_006107296.1 | 3363281-3363523 | 243 | - | hypothetical protein | Virulence |
4 | NA | YP_006107297.1 | 3363927-3364151 | 225 | - | hypothetical protein | Virulence |
5 | NA | YP_006107298.1 | 3364385-3366475 | 2091 | - | putative exogenous TonB-dependent siderophore receptor R4 | Virulence |
6 | NA | YP_006107299.1 | 3366975-3367799 | 825 | - | IS2 transposase | - |
7 | NA | YP_006107300.1 | 3367838-3368203 | 366 | - | IS2 element protein | - |
8 | NA | YP_006107301.1 | 3368355-3369341 | 987 | - | hypothetical protein | - |
9 | nanR1 | YP_006107302.1 | 3369441-3370175 | 735 | + | GntR family transcriptional regulator | - |
10 | NA | YP_006107303.1 | 3370211-3371134 | 924 | - | hypothetical protein | - |
11 | NA | YP_006107304.1 | 3371196-3372305 | 1110 | - | kelch repeat protein | - |
12 | NA | YP_006107305.1 | 3372318-3373028 | 711 | - | oligogalacturonate-specific porin protein | - |
13 | NA | YP_006107306.1 | 3373074-3373904 | 831 | - | hypothetical protein | - |
14 | NA | YP_006107307.1 | 3373908-3375380 | 1473 | - | major facilitator superfamily MFS1 | - |
15 | NA | YP_006107308.1 | 3375429-3376304 | 876 | - | ROK family protein | - |
16 | nanA1 | YP_006107309.1 | 3376338-3377255 | 918 | - | N-acetylneuraminate lyase 2 | - |
17 | NA | YP_006107310.1 | 3377916-3378341 | 426 | + | putative transposase | - |
18 | NA | YP_006107311.1 | 3378338-3378688 | 351 | + | putative transposase | - |
19 | NA | YP_006107312.1 | 3378719-3379819 | 1101 | + | putative transposase | - |
20 | NA | YP_006107313.1 | 3379816-3381354 | 1539 | + | putative transposase | - |
21 | NA | YP_006107314.1 | 3381575-3381958 | 384 | - | hypothetical protein | Virulence |
22 | NA | YP_006107315.1 | 3382125-3382694 | 570 | - | hypothetical protein | Virulence |
23 | NA | YP_006107316.1 | 3383423-3383563 | 141 | - | hemolysin expression modulating protein | Virulence |
24 | NA | YP_006107317.1 | 3384520-3384726 | 207 | + | putative regulatory protein | Virulence |
25 | NA | YP_006107318.1 | 3384812-3385384 | 573 | + | hypothetical protein | Virulence |
26 | NA | YP_006107319.1 | 3385505-3386995 | 1491 | - | hypothetical protein | - |
27 | NA | YP_006107320.1 | 3387190-3387411 | 222 | - | hypothetical protein | - |
28 | NA | YP_006107321.1 | 3388327-3389199 | 873 | + | putative GTPase | Virulence |
29 | NA | YP_006107322.1 | 3389533-3392655 | 3123 | + | putative antigen 43 | Virulence |
30 | NA | YP_006107323.1 | 3392804-3393877 | 1074 | + | membrane protein | - |
31 | NA | YP_006107324.1 | 3393953-3394408 | 456 | + | hypothetical protein | Virulence |
32 | NA | YP_006107325.1 | 3394487-3394720 | 234 | + | hypothetical protein | Virulence |
33 | NA | YP_006107326.1 | 3394821-3395639 | 819 | + | hypothetical protein | Virulence |
34 | NA | YP_006107327.1 | 3395694-3396179 | 486 | + | putative antirestriction protein | Virulence |
35 | NA | YP_006107328.1 | 3396195-3396671 | 477 | + | DNA repair protein | Virulence |
36 | NA | YP_006107329.1 | 3396734-3396955 | 222 | + | hypothetical protein | Virulence |
37 | NA | YP_006107330.1 | 3396974-3397618 | 645 | + | hypothetical protein | - |
38 | NA | YP_006107331.1 | 3397668-3398036 | 369 | + | YagB/YeeU/YfjZ family protein | Virulence |
39 | NA | YP_006107332.1 | 3398125-3398502 | 378 | + | hypothetical protein | Virulence |
40 | NA | YP_006107333.1 | 3398499-3398987 | 489 | + | hypothetical protein | Virulence |
41 | NA | YP_006107334.1 | 3398770-3399201 | 432 | + | hypothetical protein | - |
42 | NA | YP_006107335.1 | 3399283-3400131 | 849 | + | hypothetical protein | Virulence |
43 | NA | YP_006107336.1 | 3400200-3400595 | 396 | + | hypothetical protein | - |
44 | NA | YP_006107337.1 | 3400588-3401328 | 741 | + | hypothetical protein | - |
45 | NA | YP_006107338.1 | 3401300-3401521 | 222 | + | hypothetical protein | - |
46 | kpsF | YP_006107339.1 | 3402919-3403902 | 984 | + | polysialic acid capsule synthesis protein KpsF | Virulence |
47 | kpsE | YP_006107340.1 | 3403974-3405122 | 1149 | + | polysialic acid capsule export inner-membrane protein KpsE | Virulence |
48 | kpsD | YP_006107341.1 | 3405146-3406822 | 1677 | + | polysialic acid capsule transport protein KpsD | Virulence |
49 | kpsU | YP_006107342.1 | 3406832-3407572 | 741 | + | 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU | Virulence |
50 | kpsC | YP_006107343.1 | 3407569-3409596 | 2028 | + | polysialic acid capsule polysaccharide export protein KpsC | Virulence |
51 | kpsS | YP_006107344.1 | 3409631-3410800 | 1170 | + | polysialic acid capsule biosynthesis protein KpsS | Virulence |
52 | NA | YP_006107345.1 | 3411139-3412317 | 1179 | - | UDP-glucose 6-dehydrogenase | Virulence |
53 | NA | YP_006107346.1 | 3412359-3413921 | 1563 | - | glycosyl transferase family 2 protein | - |
54 | NA | YP_006107347.1 | 3414617-3414919 | 303 | + | hypothetical protein | - |
55 | kfiB | YP_006107348.1 | 3415213-3416820 | 1608 | - | KfiB protein | - |
56 | NA | YP_006107349.1 | 3417252-3417968 | 717 | - | hypothetical protein | - |
57 | kpsT | YP_006107350.1 | 3418953-3419627 | 675 | - | polysialic acid capsule biosynthesis transport protein KpsT | Virulence |
58 | kpsM | YP_006107351.1 | 3419624-3420400 | 777 | - | polysialic acid capsule biosynthesis transport protein KpsM | Virulence |
59 | gspM1 | YP_006107352.1 | 3421458-3421994 | 537 | - | general secretion pathway protein GspM | - |
60 | gspL1 | YP_006107353.1 | 3421996-3423174 | 1179 | - | general secretion pathway protein GspL | Virulence |
61 | gspK1 | YP_006107354.1 | 3423171-3424148 | 978 | - | general secretion pathway protein GspK | Virulence |
62 | gspJ1 | YP_006107355.1 | 3424145-3424750 | 606 | - | general secretion pathway protein GspJ | Virulence |
63 | gspI1 | YP_006107356.1 | 3424747-3425118 | 372 | - | general secretion pathway protein GspI | Virulence |
64 | gspH1 | YP_006107357.1 | 3425115-3425678 | 564 | - | general secretion pathway protein GspH | Virulence |
65 | gspG1 | YP_006107358.1 | 3425682-3426137 | 456 | - | general secretion pathway protein GspG | Virulence |
66 | gspF1 | YP_006107359.1 | 3426154-3427377 | 1224 | - | general secretion pathway protein GspF | Virulence |
67 | gspE1 | YP_006107360.1 | 3427377-3428870 | 1494 | - | general secretory pathway protein GspE | Virulence |
68 | gspD1 | YP_006107361.1 | 3428870-3430930 | 2061 | - | general secretion pathway protein GspD | Virulence |
69 | gspC1 | YP_006107362.1 | 3430960-3431778 | 819 | - | general secretion pathway protein GspC | Virulence |
70 | yghG | YP_006107363.1 | 3431937-3432347 | 411 | - | hypothetical protein | - |
71 | pppA | YP_006107364.1 | 3432413-3433222 | 810 | - | bifunctional prepilin leader peptidase and methylase | Virulence |
72 | yghJ | YP_006107365.1 | 3433352-3437908 | 4557 | - | putative lipoprotein AcfD-like precursor | Virulence |
73 | NA | YP_006107366.1 | 3438059-3438259 | 201 | + | hypothetical protein | - |
74 | glcA | YP_006107367.1 | 3438393-3440075 | 1683 | - | glycolate permease GlcA | - |
75 | NA | YP_006107368.1 | 3440325-3440453 | 129 | + | hypothetical protein | - |
76 | glcB | YP_006107369.1 | 3440430-3442601 | 2172 | - | malate synthase G | - |
77 | glcG | YP_006107370.1 | 3442623-3443027 | 405 | - | protein GlcG | - |
78 | glcF | YP_006107371.1 | 3443032-3444255 | 1224 | - | glycolate oxidase iron-sulfur subunit | - |
79 | glcE | YP_006107372.1 | 3444266-3445318 | 1053 | - | glycolate oxidase subunit GlcE | - |
80 | glcD | YP_006107373.1 | 3445318-3446817 | 1500 | - | glycolate oxidase subunit GlcD | - |
81 | glcC | YP_006107374.1 | 3447068-3447832 | 765 | + | glc operon transcriptional activator | - |
82 | yghO | YP_006107375.1 | 3447839-3448981 | 1143 | - | putative DNA-binding transcriptional regulator | - |
83 | NA | YP_006107376.1 | 3449352-3451076 | 1725 | + | putative AMP-dependent synthetase | - |
84 | NA | YP_006107377.1 | 3451073-3451987 | 915 | + | NAD dependent epimerase/dehydratase family protein | - |
85 | NA | YP_006107378.1 | 3452040-3452267 | 228 | + | putative acyl carrier protein | - |
86 | NA | YP_006107379.1 | 3452267-3453439 | 1173 | + | putative serine palmitoyltransferase | - |
87 | NA | YP_006107380.1 | 3453474-3454553 | 1080 | - | putative permease | - |
88 | NA | YP_006107381.1 | 3454550-3455620 | 1071 | - | putative permease | - |
89 | NA | YP_006107382.1 | 3455651-3456211 | 561 | - | hypothetical protein | - |
90 | NA | YP_006107383.1 | 3456223-3457047 | 825 | - | hypothetical protein | - |