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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli UM146 (NC_017632) Location : 300564 - 354510 bp Size : 53947 bp GC content : 48.5 % GC bias (=GCregion - GCgenome) : -2.09 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_006109230.1 | 300564-301400 | 837 | + | hypothetical protein | - |
2 | NA | YP_006109231.1 | 301400-301960 | 561 | + | Putative transcriptional regulator | - |
3 | NA | YP_006109232.1 | 301991-303061 | 1071 | + | hypothetical protein | - |
4 | NA | YP_006109233.1 | 303058-304137 | 1080 | + | hypothetical protein | - |
5 | NA | YP_006109234.1 | 304172-304960 | 789 | - | Putative 8-amino-7-oxononanoate synthase | - |
6 | NA | YP_006109235.1 | 304993-305343 | 351 | - | putative class II aminotransferase | - |
7 | NA | YP_006109236.1 | 305343-305591 | 249 | - | hypothetical protein | - |
8 | NA | YP_006109237.1 | 305623-306537 | 915 | - | putative epimerase | - |
9 | NA | YP_006109238.1 | 306534-308225 | 1692 | - | acyl-CoA synthetase | - |
10 | NA | YP_006109239.1 | 308629-309771 | 1143 | + | putative DNA-binding transcriptional regulator | - |
11 | NA | YP_006109240.1 | 309778-310542 | 765 | - | DNA-binding transcriptional regulator GlcC | - |
12 | NA | YP_006109241.1 | 310793-312292 | 1500 | + | glycolate oxidase subunit GlcD | - |
13 | glcE | YP_006109242.1 | 312292-313344 | 1053 | + | glycolate oxidase FAD binding subunit | - |
14 | glcF | YP_006109243.1 | 313355-314578 | 1224 | + | glycolate oxidase iron-sulfur subunit | - |
15 | NA | YP_006109244.1 | 314583-314987 | 405 | + | hypothetical protein | - |
16 | NA | YP_006109245.1 | 315009-317180 | 2172 | + | malate synthase G | - |
17 | NA | YP_006109246.1 | 317536-319218 | 1683 | + | glycolate transporter | - |
18 | NA | YP_006109247.1 | 319834-324264 | 4431 | + | putative lipoprotein AcfD-like precursor | Virulence |
19 | NA | YP_006109248.1 | 324428-325237 | 810 | + | bifunctional prepilin leader peptidase and methylase | - |
20 | NA | YP_006109249.1 | 325303-325713 | 411 | + | hypothetical protein | - |
21 | NA | YP_006109250.1 | 325731-326690 | 960 | + | putative type II secretion protein GspC | Virulence |
22 | NA | YP_006109251.1 | 326720-328780 | 2061 | + | general secretion pathway protein D | Virulence |
23 | NA | YP_006109252.1 | 328780-330273 | 1494 | + | general secretion pathway protein E | Virulence |
24 | NA | YP_006109253.1 | 330273-331496 | 1224 | + | General secretion pathway protein F | Virulence |
25 | NA | YP_006109254.1 | 331513-331968 | 456 | + | putative general secretion pathway protein G precursor (epsG-like) | Virulence |
26 | NA | YP_006109255.1 | 331972-332535 | 564 | + | hypothetical protein | Virulence |
27 | NA | YP_006109256.1 | 332532-332903 | 372 | + | putative type II secretion protein (GspI-like) | Virulence |
28 | NA | YP_006109257.1 | 332936-333505 | 570 | + | hypothetical protein | Virulence |
29 | NA | YP_006109258.1 | 333502-334479 | 978 | + | putative type II secretion protein | Virulence |
30 | NA | YP_006109259.1 | 334476-335654 | 1179 | + | GspL-like protein | Virulence |
31 | NA | YP_006109260.1 | 335656-336192 | 537 | + | putative general secretion pathway protein YghD | Virulence |
32 | NA | YP_006109261.1 | 337250-338026 | 777 | + | Polysialic acid transport protein | Virulence |
33 | NA | YP_006109262.1 | 338023-338682 | 660 | + | Polysialic acid transport ATP-binding protein | Virulence |
34 | NA | YP_006109263.1 | 338732-339355 | 624 | + | NeuD protein involved in sialic acid synthesis | - |
35 | NA | YP_006109264.1 | 340391-341647 | 1257 | + | N-acylneuraminate cytidylyltransferase | - |
36 | NA | YP_006109265.1 | 341644-342819 | 1176 | + | UDP-N-acetylglucosamine 2-epimerase | Virulence |
37 | NA | YP_006109266.1 | 342812-343903 | 1092 | + | polysialic acid biosynthesis protein | - |
38 | NA | YP_006109267.1 | 343949-345178 | 1230 | + | Poly-alpha-2,8 sialosyl sialyltransferase | - |
39 | NA | YP_006109268.1 | 345328-346533 | 1206 | - | capsule polysaccharide biosynthesis protein | Virulence |
40 | NA | YP_006109269.1 | 346568-348595 | 2028 | - | Capsule polysaccharide export protein | Virulence |
41 | NA | YP_006109270.1 | 348592-349332 | 741 | - | 3-deoxy-manno-octulosonate cytidylyltransferase | Virulence |
42 | NA | YP_006109271.1 | 349342-351018 | 1677 | - | Polysialic acid transport protein precursor | Virulence |
43 | NA | YP_006109272.1 | 351042-352190 | 1149 | - | Capsule polysaccharide export inner-membrane protein kpsE | Virulence |
44 | NA | YP_006109273.1 | 352262-353281 | 1020 | - | Polysialic acid capsule expression protein | Virulence |
45 | NA | YP_006109274.1 | 354055-354210 | 156 | - | hypothetical protein | - |
46 | tRNA-Phe | - | 354435-354510 | 76 | - | tRNA-Phe | - |