PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli ETEC H10407 (NC_017633)
Location : 232196 - 243511 bp
Size : 11316 bp
GC content : 49.4 %
GC bias (=GCregion - GCgenome) : -1.38 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Asp - 232196-232269 74 + tRNA-Asp-
2NA YP_006113789.1 232435-233238 804 + 2,5-diketo-D-gluconic acid reductase B-
3NA YP_006113790.1 233235-234149 915 - LysR family transcriptional regulator-
4NA YP_006113791.1 234390-235190 801 + hypothetical protein-
5NA YP_006113792.1 235268-236038 771 + putative methyltransferase-
6NA YP_006113793.1 236086-237444 1359 - membrane-bound lytic murein transglycosylase D-
7NA YP_006113794.1 237516-238271 756 - hydroxyacylglutathione hydrolase-
8NA YP_006113795.1 238305-239027 723 + hypothetical protein-
9NA YP_006113796.1 239024-239491 468 - ribonuclease HI-
10NA YP_006113797.1 239556-240287 732 + DNA polymerase III subunit epsilon-
11tRNA-Asp - 240420-240493 74 + tRNA-Asp-
12NA YP_006113798.1 240629-240862 234 - hypothetical protein-
13NA YP_006113799.1 240934-241473 540 - hypothetical proteinVirulence
14NA YP_006113800.1 241554-241757 204 - hypothetical proteinVirulence
15NA YP_006113801.1 241789-242280 492 - hypothetical proteinVirulence
16NA YP_006113802.1 242277-242600 324 - CP4-44 prophage; putative toxin of the YeeV-YeeU toxin-antitoxin systemVirulence
17NA - 243134-243511 378 + --


tRNA-Asp tRNA-Asp PI: Esc.7- - - - - - PI: Esc.7.NC_004431_P2c5143 c5146 c5147 c5148 c5149 PI: Esc.8.1- yeeW yeeV insB PI: Shi.5- - - - PI: Pho.1-mltD gloB orf71 rnhA dnaQ -

• PAIs homologous to this region

PAI II CFT073 (Escherichia coli CFT073)
PAI II CFT073 (Escherichia coli CFT073)
PAI-I AL862 (Escherichia coli AL862)
tcd island (Photorhabdus luminescens W14)
SRL (Shigella flexneri YSH6000)