Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli ETEC H10407 (NC_017633) Location : 3444844 - 3522022 bp Size : 77179 bp GC content : 51.8 % GC bias (=GCregion - GCgenome) : 1.03 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_006116734.1 | 3444844-3445131 | 288 | + | PTS system transporter subunit IIB | Virulence |
2 | join | - | 3445162-3448359 | 3198 | + | - | - |
3 | NA | YP_006116735.1 | 3445677-3446459 | 783 | - | insertion sequence IS100, ATP-binding protein | - |
4 | NA | YP_006116736.1 | 3446456-3447478 | 1023 | - | transposase for insertion sequence IS100 | - |
5 | NA | YP_006116737.1 | 3448575-3448796 | 222 | - | putative transposase | - |
6 | NA | YP_006116738.1 | 3449281-3450294 | 1014 | - | hypothetical protein | - |
7 | NA | YP_006116739.1 | 3450306-3451622 | 1317 | - | major facilitator superfamily protein | - |
8 | NA | YP_006116740.1 | 3451650-3452570 | 921 | - | putative sugar kinase | - |
9 | NA | YP_006116741.1 | 3452873-3453655 | 783 | + | DeoR-family transcriptional regulator | - |
10 | NA | YP_006116742.1 | 3454658-3455092 | 435 | - | hypothetical protein | Virulence |
11 | NA | YP_006116743.1 | 3455080-3455487 | 408 | - | hypothetical protein | Virulence |
12 | NA | YP_006116744.1 | 3455741-3456310 | 570 | - | hypothetical protein | Virulence |
13 | NA | YP_006116745.1 | 3456577-3457224 | 648 | + | transposase | - |
14 | NA | YP_006116746.1 | 3457591-3459162 | 1572 | + | transposase | - |
15 | NA | YP_006116747.1 | 3459355-3460563 | 1209 | + | transposase | - |
16 | NA | YP_006116748.1 | 3461844-3462104 | 261 | + | hypothetical protein | Virulence |
17 | NA | YP_006116749.1 | 3462198-3462800 | 603 | + | hypothetical protein | Virulence |
18 | NA | YP_006116750.1 | 3464731-3465888 | 1158 | + | hypothetical protein | - |
19 | NA | YP_006116751.1 | 3465953-3466189 | 237 | + | hypothetical protein | - |
20 | NA | YP_006116752.1 | 3466267-3467838 | 1572 | - | transposase | - |
21 | NA | YP_006116753.1 | 3468205-3468882 | 678 | - | transposase | - |
22 | NA | - | 3469165-3469974 | 810 | + | - | - |
23 | NA | YP_006116754.1 | 3470092-3470829 | 738 | - | hypothetical protein | - |
24 | NA | YP_006116755.1 | 3471001-3472047 | 1047 | + | putative GTP-binding protein | Virulence |
25 | join | - | 3472419-3477991 | 5573 | + | - | - |
26 | NA | YP_006116756.1 | 3474404-3475942 | 1539 | - | transposase | - |
27 | NA | YP_006116757.1 | 3476336-3476737 | 402 | - | putative transposase | - |
28 | NA | YP_006116758.1 | 3478112-3480628 | 2517 | + | integral membrane protein | Virulence |
29 | NA | YP_006116759.1 | 3480704-3481159 | 456 | + | hypothetical protein | Virulence |
30 | NA | YP_006116760.1 | 3481238-3481471 | 234 | + | hypothetical protein | Virulence |
31 | NA | YP_006116761.1 | 3481571-3482389 | 819 | + | hypothetical protein | Virulence |
32 | NA | YP_006116762.1 | 3482471-3482950 | 480 | + | putative antirestriction protein | Virulence |
33 | yeeS | YP_006116763.1 | 3482962-3483438 | 477 | + | putative RadC DNA repair protein | Virulence |
34 | NA | YP_006116764.1 | 3483885-3484253 | 369 | + | hypothetical protein | Virulence |
35 | NA | YP_006116765.1 | 3484343-3484717 | 375 | + | hypothetical protein | Virulence |
36 | NA | YP_006116766.1 | 3484714-3485202 | 489 | + | hypothetical protein | Virulence |
37 | NA | YP_006116767.1 | 3485214-3485411 | 198 | + | hypothetical protein | Virulence |
38 | NA | YP_006116768.1 | 3485508-3486077 | 570 | + | hypothetical protein | - |
39 | NA | YP_006116769.1 | 3486358-3486894 | 537 | - | type II secretion system protein M | Virulence |
40 | NA | YP_006116770.1 | 3486896-3488074 | 1179 | - | type II secretion system protein L | Virulence |
41 | NA | YP_006116771.1 | 3488071-3489009 | 939 | - | type II secretion system protein K | Virulence |
42 | NA | YP_006116772.1 | 3489051-3489650 | 600 | - | type II secretion system protein J | Virulence |
43 | NA | YP_006116773.1 | 3489647-3490018 | 372 | - | type II secretion system protein I | Virulence |
44 | NA | YP_006116774.1 | 3490015-3490578 | 564 | - | type II secretion system protein H | Virulence |
45 | NA | YP_006116775.1 | 3490582-3491037 | 456 | - | type II secretion system protein G | Virulence |
46 | NA | YP_006116776.1 | 3491054-3492277 | 1224 | - | type II secretion system protein F | Virulence |
47 | NA | YP_006116777.1 | 3492277-3493770 | 1494 | - | type II secretion system protein E | Virulence |
48 | NA | YP_006116778.1 | 3493770-3495830 | 2061 | - | type II secretion system protein D | Virulence |
49 | NA | YP_006116779.1 | 3495860-3496690 | 831 | - | type II secretion system protein C | Virulence |
50 | NA | YP_006116780.1 | 3496837-3497247 | 411 | - | type II secretion system lipoprotein | - |
51 | NA | YP_006116781.1 | 3497313-3498122 | 810 | - | type II secretion system leader peptidase | Virulence |
52 | NA | YP_006116782.1 | 3498320-3502879 | 4560 | - | accessory colonization factor | Virulence |
53 | NA | YP_006116783.1 | 3503364-3505046 | 1683 | - | glycolate permease | - |
54 | NA | YP_006116784.1 | 3505401-3507572 | 2172 | - | malate synthase G | - |
55 | NA | YP_006116785.1 | 3507594-3507998 | 405 | - | hypothetical protein | - |
56 | NA | YP_006116786.1 | 3508003-3509226 | 1224 | - | glycolate oxidase iron-sulfur subunit | - |
57 | NA | YP_006116787.1 | 3509237-3510289 | 1053 | - | glycolate oxidase subunit | - |
58 | NA | YP_006116788.1 | 3510289-3511788 | 1500 | - | glycolate oxidase subunit | - |
59 | NA | YP_006116789.1 | 3512039-3512803 | 765 | + | glc operon transcriptional activator | - |
60 | NA | YP_006116790.1 | 3512810-3513991 | 1182 | - | hypothetical protein | - |
61 | NA | YP_006116791.1 | 3514429-3516051 | 1623 | + | AMP-binding protein | - |
62 | NA | YP_006116792.1 | 3516048-3516962 | 915 | + | hypothetical protein | - |
63 | NA | YP_006116793.1 | 3516994-3517242 | 249 | + | hypothetical protein | - |
64 | NA | YP_006116794.1 | 3517242-3518414 | 1173 | + | putative aminotransferase | - |
65 | NA | YP_006116795.1 | 3518449-3519609 | 1161 | - | putative permease | - |
66 | NA | YP_006116796.1 | 3519525-3520595 | 1071 | - | putative permease | - |
67 | NA | YP_006116797.1 | 3520626-3521186 | 561 | - | hypothetical protein | - |
68 | NA | YP_006116798.1 | 3521198-3522022 | 825 | - | hypothetical protein | - |