PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli W (NC_017635)
Location : 4050584 - 4062151 bp
Size : 11568 bp
GC content : 45.4 %
GC bias (=GCregion - GCgenome) : -5.4 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_006126521.1 4050584-4050787 204 - hypothetical proteinVirulence
2NA YP_006126522.1 4051156-4052316 1161 + hypothetical protein-
3NA YP_006126523.1 4052719-4053012 294 + hypothetical protein-
4insF3 YP_006126524.1 4053040-4053906 867 - IS3 Transposase ORF2-
5insE3 YP_006126525.1 4053903-4054202 300 - IS3 Transposase ORF1-
6NA YP_006126526.1 4054383-4055237 855 + hypothetical protein-
7NA YP_006126527.1 4055249-4055446 198 + hypothetical protein-
8NA YP_006126528.1 4055454-4055930 477 + hypothetical protein-
9yfjQ YP_006126529.1 4056002-4056823 822 + hypothetical proteinVirulence
10yfjY YP_006126530.1 4056893-4057363 471 + hypothetical proteinVirulence
11ykfH YP_006126531.1 4057372-4057593 222 + hypothetical proteinVirulence
12NA YP_006126532.1 4057625-4057990 366 + hypothetical proteinVirulence
13NA YP_006126533.1 4058024-4058344 321 + hypothetical proteinVirulence
14NA - 4058583-4058729 147 + --
15setC YP_006126534.1 4059111-4060295 1185 + sugar efflux system-
16yicL YP_006126535.1 4060406-4061329 924 + inner membrane protein-
17nlpA YP_006126536.1 4061333-4062151 819 - hypothetical protein-