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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli W (NC_017635) Location : 3311517 - 3347353 bp Size : 35837 bp GC content : 52.7 % GC bias (=GCregion - GCgenome) : 1.83 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | tRNA-Phe | - | 3311517-3311592 | 76 | + | tRNA-Phe | - |
2 | gspM | YP_006125842.1 | 3311741-3312277 | 537 | - | type II secretion system lipoprotein M | Virulence |
3 | gspL | YP_006125843.1 | 3312279-3313457 | 1179 | - | type II secretion system lipoprotein L | Virulence |
4 | gspK | YP_006125844.1 | 3313454-3314431 | 978 | - | type II secretion system lipoprotein K | Virulence |
5 | gspJ | YP_006125845.1 | 3314428-3315033 | 606 | - | type II secretion system lipoprotein J | Virulence |
6 | gspI | YP_006125846.1 | 3315030-3315401 | 372 | - | type II secretion system lipoprotein I | Virulence |
7 | gspH | YP_006125847.1 | 3315398-3315961 | 564 | - | type II secretion system lipoprotein H | Virulence |
8 | gspG | YP_006125848.1 | 3315965-3316420 | 456 | - | type II secretion system lipoprotein G | Virulence |
9 | gspF | YP_006125849.1 | 3316437-3317660 | 1224 | - | type II secretion system lipoprotein F | Virulence |
10 | gspE | YP_006125850.1 | 3317660-3319153 | 1494 | - | type II secretion system lipoprotein E | Virulence |
11 | gspD | YP_006125851.1 | 3319153-3321213 | 2061 | - | type II secretion system lipoprotein D | Virulence |
12 | gspC | YP_006125852.1 | 3321243-3322073 | 831 | - | type II secretion system lipoprotein C | Virulence |
13 | yghG | YP_006125853.1 | 3322220-3322630 | 411 | - | type II secretion system lipoprotein | - |
14 | pppA | YP_006125854.1 | 3322696-3323505 | 810 | - | type II secretion system leader peptidase | Virulence |
15 | yghJ | YP_006125855.1 | 3323653-3328215 | 4563 | - | accessory colonization factor | Virulence |
16 | glcA | YP_006125856.1 | 3328701-3330383 | 1683 | - | glycolate permease | - |
17 | glcB | YP_006125857.1 | 3330739-3332910 | 2172 | - | malate synthase G | - |
18 | glcG | YP_006125858.1 | 3332932-3333336 | 405 | - | hypothetical protein | - |
19 | glcF | YP_006125859.1 | 3333341-3334564 | 1224 | - | glycolate oxidase iron-sulfur subunit | - |
20 | glcE | YP_006125860.1 | 3334575-3335627 | 1053 | - | glycolate oxidase FAD binding subunit | - |
21 | glcD | YP_006125861.1 | 3335627-3337126 | 1500 | - | glycolate oxidase subunit, FAD-linked | - |
22 | glcC | YP_006125862.1 | 3337377-3338141 | 765 | + | DNA-binding protein transcriptional dual regulator, glycolate-binding protein | - |
23 | yghO | - | 3338148-3339290 | 1143 | - | - | - |
24 | NA | YP_006125863.1 | 3339661-3341382 | 1722 | + | acyl-CoA synthetase | - |
25 | NA | YP_006125864.1 | 3341379-3342293 | 915 | + | putative epimerase | - |
26 | NA | YP_006125865.1 | 3342325-3342573 | 249 | + | putative acyl carrier protein | - |
27 | NA | YP_006125866.1 | 3342573-3343745 | 1173 | + | putative aminotransferase | - |
28 | NA | YP_006125867.1 | 3343780-3344859 | 1080 | - | YjgP/YjgQ family permease | - |
29 | NA | YP_006125868.1 | 3344856-3345926 | 1071 | - | YjgP/YjgQ family permease | - |
30 | NA | YP_006125869.1 | 3345957-3346517 | 561 | - | putative transcriptional regulator | - |
31 | NA | YP_006125870.1 | 3346529-3347353 | 825 | - | hypothetical protein | - |