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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli UMNK88 (NC_017641) Location : 3570126 - 3618635 bp Size : 48510 bp GC content : 52.6 % GC bias (=GCregion - GCgenome) : 1.9 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_006135391.1 | 3570126-3570551 | 426 | - | hypothetical protein | Virulence |
2 | NA | YP_006135392.1 | 3570548-3570703 | 156 | - | hypothetical protein | - |
3 | NA | YP_006135393.1 | 3570972-3571298 | 327 | + | hypothetical protein | - |
4 | NA | YP_006135394.1 | 3571298-3572263 | 966 | + | hypothetical protein | - |
5 | NA | YP_006135395.1 | 3572674-3573414 | 741 | - | hypothetical protein | - |
6 | NA | YP_006135396.1 | 3573768-3574640 | 873 | + | hypothetical protein | Virulence |
7 | NA | YP_006135397.1 | 3574843-3575001 | 159 | + | hypothetical protein | - |
8 | NA | YP_006135398.1 | 3575012-3577858 | 2847 | + | antigen 43 protein | Virulence |
9 | NA | YP_006135399.1 | 3577929-3578162 | 234 | + | hypothetical protein | Virulence |
10 | NA | YP_006135400.1 | 3578252-3579070 | 819 | + | hypothetical protein | Virulence |
11 | NA | YP_006135401.1 | 3579162-3579647 | 486 | + | hypothetical protein | Virulence |
12 | NA | YP_006135402.1 | 3579662-3580138 | 477 | + | DNA repair protein RadC | Virulence |
13 | NA | YP_006135403.1 | 3580621-3580869 | 249 | + | antitoxin of the YeeV-YeeU toxin-antitoxin system YeeU | - |
14 | NA | YP_006135404.1 | 3580959-3581336 | 378 | + | toxin of the YeeV-YeeU toxin-antitoxin system YeeV | Virulence |
15 | NA | YP_006135405.1 | 3581333-3581755 | 423 | + | hypothetical protein | - |
16 | NA | YP_006135406.1 | 3581840-3582682 | 843 | + | hypothetical protein | Virulence |
17 | NA | YP_006135407.1 | 3582963-3583499 | 537 | - | general secretion pathway protein | Virulence |
18 | gspL | YP_006135408.1 | 3583501-3584679 | 1179 | - | general secretion pathway protein GspL | Virulence |
19 | NA | YP_006135409.1 | 3584676-3585653 | 978 | - | general secretion pathway protein GspK | Virulence |
20 | gspJ | YP_006135410.1 | 3585656-3586219 | 564 | - | general secretion pathway protein GspJ | Virulence |
21 | gspI | YP_006135411.1 | 3586252-3586623 | 372 | - | general secretion pathway protein GspI | Virulence |
22 | NA | YP_006135412.1 | 3586620-3587150 | 531 | - | general secretion pathway protein GspH | Virulence |
23 | gspG | YP_006135413.1 | 3587187-3587642 | 456 | - | general secretion pathway protein GspG | Virulence |
24 | gspF | YP_006135414.1 | 3587659-3588882 | 1224 | - | general secretion pathway protein GspF | Virulence |
25 | gspE | YP_006135415.1 | 3588882-3590375 | 1494 | - | general secretory pathway protein GspE | Virulence |
26 | gspD | YP_006135416.1 | 3590375-3592435 | 2061 | - | general secretion pathway protein GspD | Virulence |
27 | gspC | YP_006135417.1 | 3592465-3593295 | 831 | - | general secretion pathway protein GspC | Virulence |
28 | NA | YP_006135418.1 | 3593442-3593852 | 411 | - | hypothetical protein | - |
29 | NA | YP_006135419.1 | 3593918-3594727 | 810 | - | type 4 prepilin-like proteins leader peptide-processing enzyme | Virulence |
30 | NA | YP_006135420.1 | 3594925-3599493 | 4569 | - | accessory colonization factor protein AcfD | Virulence |
31 | NA | YP_006135421.1 | 3599644-3599826 | 183 | + | hypothetical protein | - |
32 | NA | YP_006135422.1 | 3599841-3599963 | 123 | - | hypothetical protein | - |
33 | NA | YP_006135423.1 | 3599978-3601642 | 1665 | - | glycolate permease GlcA | - |
34 | glcB | YP_006135424.1 | 3602015-3604186 | 2172 | - | malate synthase GlcB | - |
35 | NA | YP_006135425.1 | 3604208-3604612 | 405 | - | hypothetical protein | - |
36 | NA | YP_006135426.1 | 3604617-3605840 | 1224 | - | glycolate oxidase iron-sulfur protein subunit | - |
37 | NA | YP_006135427.1 | 3605851-3606903 | 1053 | - | glycolate oxidase protein subunit GlcE | - |
38 | glcD | YP_006135428.1 | 3606903-3608393 | 1491 | - | glycolate oxidase protein subunit GlcD | - |
39 | NA | YP_006135429.1 | 3608653-3609417 | 765 | + | glc operon transcriptional activator protein | - |
40 | NA | YP_006135430.1 | 3609424-3610566 | 1143 | - | hypothetical protein | - |
41 | NA | YP_006135431.1 | 3610976-3612664 | 1689 | + | hypothetical protein | - |
42 | NA | YP_006135432.1 | 3612661-3613575 | 915 | + | NAD-dependent epimerase/dehydratase | - |
43 | NA | YP_006135433.1 | 3613607-3613855 | 249 | + | hypothetical protein | - |
44 | NA | YP_006135434.1 | 3613855-3615027 | 1173 | + | putative serine palmitoyltransferase | - |
45 | NA | YP_006135435.1 | 3615062-3616141 | 1080 | - | hypothetical protein | - |
46 | NA | YP_006135436.1 | 3616138-3617208 | 1071 | - | hypothetical protein | - |
47 | NA | YP_006135437.1 | 3617239-3617799 | 561 | - | hypothetical protein | - |
48 | NA | YP_006135438.1 | 3617811-3618635 | 825 | - | hypothetical protein | - |