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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli CE10 (NC_017646) Location : 4955741 - 4982216 bp Size : 26476 bp GC content : 46.8 % GC bias (=GCregion - GCgenome) : -3.75 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | cadA | YP_006146806.1 | 4955741-4957888 | 2148 | - | lysine decarboxylase, acid-inducible | Virulence |
2 | cadB | YP_006146807.1 | 4957968-4959302 | 1335 | - | putative lysine/cadaverine transporter | Virulence |
3 | cadC | YP_006146808.1 | 4959668-4961206 | 1539 | - | DNA-binding transcriptional activator | - |
4 | NA | YP_006146809.1 | 4962010-4962780 | 771 | - | hypothetical protein | - |
5 | NA | YP_006146810.1 | 4962984-4963259 | 276 | + | putative transposase A, IS3411 | - |
6 | NA | YP_006146811.1 | 4963256-4964146 | 891 | + | putative transposase B, IS3411 | - |
7 | NA | YP_006146812.1 | 4964203-4964376 | 174 | + | hypothetical protein | Virulence |
8 | NA | YP_006146813.1 | 4964405-4964524 | 120 | + | hypothetical protein | - |
9 | papI2 | YP_006146814.1 | 4964719-4964940 | 222 | - | pap operon regulatory protein PapI | Virulence |
10 | NA | YP_006146815.1 | 4965227-4965352 | 126 | + | hypothetical protein | - |
11 | papA2 | YP_006146816.1 | 4965875-4966459 | 585 | + | major pilin protein PapA | Virulence |
12 | papH | YP_006146817.1 | 4966523-4967110 | 588 | + | minor pilin protein PapH | Virulence |
13 | papC | YP_006146818.1 | 4967148-4969679 | 2532 | + | Outer membrane usher protein PapC | Virulence |
14 | papD | YP_006146819.1 | 4969765-4970484 | 720 | + | Chaperone protein PapD | Virulence |
15 | NA | YP_006146820.1 | 4970769-4971446 | 678 | - | hypothetical protein | Virulence |
16 | papK | YP_006146821.1 | 4971424-4971648 | 225 | + | fimbrial adapter PapK | - |
17 | papE2 | YP_006146822.1 | 4971675-4972196 | 522 | + | fimbrial tip protein PapE | Virulence |
18 | papF2 | YP_006146823.1 | 4972271-4972771 | 501 | + | fimbrial adapter PapF | Virulence |
19 | papG | YP_006146824.1 | 4972815-4973825 | 1011 | + | fimbrial PapG protein | Virulence |
20 | tia | YP_006146825.1 | 4974185-4974931 | 747 | + | Tia invasion determinant | Virulence |
21 | NA | YP_006146826.1 | 4975106-4976605 | 1500 | + | putative membrane-associated, metal-dependent hydrolase | Virulence |
22 | NA | YP_006146827.1 | 4976714-4980241 | 3528 | - | superfamily I DNA helicase | Virulence |
23 | NA | YP_006146828.1 | 4980681-4981943 | 1263 | - | Prophage integrase | - |
24 | tRNA-Phe | - | 4982141-4982216 | 76 | - | tRNA-Phe | - |