PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli clone D i2 (NC_017651)
Location : 260391 - 292389 bp
Size : 31999 bp
GC content : 49.6 %
GC bias (=GCregion - GCgenome) : -0.93 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_006147483.1 260391-261077 687 + putative transposase-
2NA YP_006147484.1 261125-261379 255 + hypothetical protein-
3NA YP_006147485.1 261458-261805 348 - hypothetical protein-
4NA YP_006147486.1 261947-262324 378 - hypothetical proteinVirulence
5NA YP_006147487.1 262371-262853 483 - hypothetical proteinVirulence
6NA YP_006147488.1 262795-263439 645 - hypothetical protein-
7yeeS YP_006147489.1 263742-264218 477 - putative radC-like protein YeeSVirulence
8NA YP_006147490.1 264234-264779 546 - hypothetical proteinVirulence
9NA YP_006147491.1 264801-265025 225 - hypothetical protein-
10NA YP_006147492.1 265046-265867 822 - hypothetical proteinVirulence
11NA YP_006147493.1 265967-266200 234 - hypothetical proteinVirulence
12NA YP_006147494.1 266318-266803 486 - hypothetical protein-
13NA YP_006147495.1 266807-266926 120 - hypothetical protein-
14NA YP_006147496.1 266926-267174 249 - hypothetical protein-
15NA YP_006147497.1 267205-267843 639 - hypothetical protein-
16NA YP_006147498.1 267890-268396 507 - hypothetical protein-
17NA YP_006147499.1 268486-269556 1071 - hypothetical protein-
18NA YP_006147500.1 269553-270458 906 - hypothetical protein-
19NA YP_006147501.1 270455-272851 2397 - hypothetical protein-
20NA YP_006147502.1 273069-273566 498 - hypothetical protein-
21NA YP_006147503.1 273725-274828 1104 - hypothetical protein-
22NA YP_006147504.1 275218-275826 609 + hypothetical protein-
23NA YP_006147505.1 276054-276791 738 + hypothetical protein-
24NA YP_006147506.1 276909-277718 810 - hypothetical protein-
25NA YP_006147507.1 278201-280366 2166 + TonB dependent receptor-
26NA YP_006147508.1 280374-281366 993 + periplasmic binding protein-
27NA YP_006147509.1 281385-282443 1059 + ABC transporter-
28NA YP_006147510.1 282440-283207 768 + putative ABC transporter-
29NA YP_006147511.1 284056-284424 369 + hypothetical protein-
30NA YP_006147512.1 284069-284494 426 + hypothetical protein-
31NA YP_006147513.1 285026-285211 186 + hypothetical protein-
32NA YP_006147514.1 285312-285449 138 + hypothetical protein-
33NA YP_006147515.1 285358-285501 144 - hypothetical protein-
34NA YP_006147516.1 285948-286148 201 + hypothetical protein-
35NA YP_006147517.1 286051-286659 609 - hypothetical proteinVirulence
36NA YP_006147518.1 287337-288128 792 - hypothetical proteinVirulence
37NA YP_006147519.1 289203-289343 141 + hemolysin expression modulating proteinVirulence
38NA YP_006147520.1 289575-290174 600 + hypothetical proteinVirulence
39NA YP_006147521.1 290540-290929 390 + hypothetical proteinVirulence
40NA YP_006147522.1 290926-291351 426 + hypothetical proteinVirulence
41NA YP_006147523.1 291553-291795 243 + hypothetical protein-
42NA YP_006147524.1 291823-292389 567 + hypothetical protein-