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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli clone D i2 (NC_017651) Location : 1141066 - 1203336 bp Size : 62271 bp GC content : 47.8 % GC bias (=GCregion - GCgenome) : -2.73 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_006148324.1 | 1141066-1142007 | 942 | - | transposase insF | - |
2 | NA | YP_006148325.1 | 1141991-1142215 | 225 | - | transposase insE | - |
3 | mchB | YP_006148326.1 | 1143383-1143676 | 294 | + | MchB protein | - |
4 | mchC | YP_006148327.1 | 1143948-1145498 | 1551 | + | MchC protein | - |
5 | mchD | YP_006148328.1 | 1145524-1145976 | 453 | + | MchD protein | - |
6 | mchE | YP_006148329.1 | 1146129-1147403 | 1275 | + | microcin H47 secretion protein | - |
7 | mchF | YP_006148330.1 | 1147378-1149492 | 2115 | + | microcin H47 secretion ATP-binding protein | - |
8 | NA | YP_006148331.1 | 1149528-1149749 | 222 | + | hypothetical protein | Virulence |
9 | NA | YP_006148332.1 | 1150199-1150885 | 687 | - | hypothetical protein | Virulence |
10 | NA | YP_006148333.1 | 1150985-1151455 | 471 | - | hypothetical protein | Virulence |
11 | NA | YP_006148334.1 | 1151901-1152413 | 513 | + | hypothetical protein | Virulence |
12 | NA | YP_006148335.1 | 1152646-1153224 | 579 | + | hypothetical protein | - |
13 | NA | YP_006148336.1 | 1153247-1153393 | 147 | + | hypothetical protein | - |
14 | sfaC | YP_006148337.1 | 1153499-1153783 | 285 | - | putative F1C and S fimbrial switch regulatory protein | Virulence |
15 | sfaB | YP_006148338.1 | 1154139-1154468 | 330 | + | putative F1C and S fimbrial switch regulatory protein | Virulence |
16 | focA | YP_006148339.1 | 1154840-1155382 | 543 | + | F1C major fimbrial subunit precursor | Virulence |
17 | sfaD | YP_006148340.1 | 1155468-1155992 | 525 | + | putative minor F1C fimbrial subunit precursor | Virulence |
18 | focC | YP_006148341.1 | 1156033-1156728 | 696 | + | F1C periplasmic chaperone | Virulence |
19 | focD | YP_006148342.1 | 1156750-1159428 | 2679 | + | F1C fimbrial usher | Virulence |
20 | focF | YP_006148343.1 | 1159441-1159968 | 528 | + | F1C minor fimbrial subunit F | Virulence |
21 | focG | YP_006148344.1 | 1159990-1160493 | 504 | + | F1C minor fimbrial subunit protein G precursor | Virulence |
22 | focH | YP_006148345.1 | 1160444-1161454 | 1011 | + | F1C putative fimbrial adhesin precursor | Virulence |
23 | NA | YP_006148346.1 | 1161510-1161638 | 129 | + | hypothetical protein | - |
24 | NA | YP_006148347.1 | 1161758-1162498 | 741 | + | hypothetical protein | - |
25 | focX | YP_006148348.1 | 1162645-1163196 | 552 | + | putative regulatory protein | Virulence |
26 | NA | YP_006148349.1 | 1163522-1164559 | 1038 | - | hypothetical protein | - |
27 | NA | YP_006148350.1 | 1164569-1164763 | 195 | + | hypothetical protein | - |
28 | iroN | YP_006148351.1 | 1164789-1166966 | 2178 | + | outer membrane receptor FepA | Virulence |
29 | iroE | YP_006148352.1 | 1167011-1167967 | 957 | - | IroE protein | Virulence |
30 | iroD | YP_006148353.1 | 1168052-1169281 | 1230 | - | ferric enterochelin esterase | Virulence |
31 | iroC | YP_006148354.1 | 1169385-1173122 | 3738 | - | ABC transporter ATP-binding protein | Virulence |
32 | iroB | YP_006148355.1 | 1173184-1174347 | 1164 | - | putative glucosyltransferase | Virulence |
33 | NA | YP_006148356.1 | 1174837-1175136 | 300 | + | hypothetical protein | - |
34 | NA | YP_006148357.1 | 1175263-1175772 | 510 | + | transposase | - |
35 | NA | YP_006148358.1 | 1175900-1176262 | 363 | - | transposase insG | - |
36 | NA | YP_006148359.1 | 1176278-1176433 | 156 | - | hypothetical protein | - |
37 | NA | YP_006148360.1 | 1176953-1177315 | 363 | + | hypothetical protein | - |
38 | NA | YP_006148361.1 | 1177137-1177571 | 435 | + | hypothetical protein | - |
39 | tRNA-Arg | - | 1177779-1177855 | 77 | + | tRNA-Arg | - |
40 | NA | YP_006148362.1 | 1178134-1178592 | 459 | - | putative transposase | - |
41 | NA | YP_006148363.1 | 1178604-1179497 | 894 | - | hypothetical protein | Virulence |
42 | NA | YP_006148364.1 | 1179843-1181813 | 1971 | + | Outer membrane heme/hemoglobin receptor | Virulence |
43 | NA | YP_006148365.1 | 1181832-1182623 | 792 | + | hypothetical protein | Virulence |
44 | NA | YP_006148366.1 | 1182824-1184086 | 1263 | + | hypothetical protein | Virulence |
45 | NA | YP_006148367.1 | 1184193-1184375 | 183 | - | hypothetical protein | Virulence |
46 | NA | YP_006148368.1 | 1185037-1186173 | 1137 | + | hypothetical protein | - |
47 | NA | YP_006148369.1 | 1186209-1186751 | 543 | + | hypothetical protein | - |
48 | NA | YP_006148370.1 | 1189125-1189421 | 297 | - | hypothetical protein | - |
49 | NA | YP_006148371.1 | 1189721-1190593 | 873 | + | hypothetical protein | Virulence |
50 | NA | YP_006148372.1 | 1190768-1194043 | 3276 | + | antigen 43 precursor | Virulence |
51 | NA | YP_006148373.1 | 1194158-1196680 | 2523 | + | hypothetical protein | Virulence |
52 | NA | YP_006148374.1 | 1196756-1197211 | 456 | + | hypothetical protein | Virulence |
53 | NA | YP_006148375.1 | 1197229-1197357 | 129 | + | hypothetical protein | - |
54 | NA | YP_006148376.1 | 1197330-1197518 | 189 | - | hypothetical protein | - |
55 | NA | YP_006148377.1 | 1197622-1198443 | 822 | + | hypothetical protein | Virulence |
56 | NA | YP_006148378.1 | 1197628-1198536 | 909 | - | hypothetical protein | - |
57 | NA | YP_006148379.1 | 1198634-1199179 | 546 | + | hypothetical protein | Virulence |
58 | NA | YP_006148380.1 | 1199195-1199671 | 477 | + | putative radC-like protein yeeS | Virulence |
59 | NA | YP_006148381.1 | 1199974-1200618 | 645 | + | hypothetical protein | - |
60 | NA | YP_006148382.1 | 1201089-1201469 | 381 | + | hypothetical protein | Virulence |
61 | NA | YP_006148383.1 | 1201466-1201954 | 489 | + | hypothetical protein | Virulence |
62 | NA | YP_006148384.1 | 1201974-1202171 | 198 | + | hypothetical protein | Virulence |
63 | NA | YP_006148385.1 | 1202256-1203083 | 828 | + | hypothetical protein | Virulence |
64 | tRNA-Ser | - | 1203249-1203336 | 88 | - | tRNA-Ser | - |