PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli P12b (NC_017663)
Location : 3462534 - 3483292 bp
Size : 20759 bp
GC content : 46.5 %
GC bias (=GCregion - GCgenome) : -4.42 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_006170166.1 3462534-3462875 342 - hypothetical proteinVirulence
2yfjZ YP_006170167.1 3462896-3463204 309 - antitoxin of the YpjF-YfjZ toxin-antitoxin systemVirulence
3yfjY - 3463242-3463722 481 - --
4NA YP_006170168.1 3463734-3464198 465 - hypothetical proteinVirulence
5NA YP_006170169.1 3464624-3468091 3468 - Antigen 43 precusorVirulence
6NA YP_006170170.1 3468152-3468835 684 - hypothetical proteinVirulence
7NA YP_006170171.1 3469062-3469904 843 - hypothetical proteinVirulence
8NA YP_006170172.1 3469981-3470844 864 - hypothetical proteinVirulence
9perR YP_006170173.1 3471173-3471448 276 - HTH-type transcriptional regulator perR-
10insB YP_006170174.1 3471512-3472015 504 - IS1 protein-
11NA YP_006170175.1 3471934-3472158 225 - IS1 transposase-
12NA YP_006170176.1 3472816-3474474 1659 - hypothetical protein-
13NA YP_006170177.1 3474606-3478085 3480 - Hydrolase (HAD superfamily)-like protein-
14kpsT YP_006170178.1 3478151-3478828 678 - KpsT proteinVirulence
15kpsM YP_006170179.1 3478825-3479601 777 - ABC-type polysaccharide/polyol phosphate export systems permeaseVirulence
16NA YP_006170180.1 3480165-3480854 690 + Putative transposase-
17NA YP_006170181.1 3480902-3481060 159 + ATP-dependent DNA helicase-like protein-
18NA YP_006170182.1 3481116-3481742 627 - hypothetical protein-
19NA YP_006170183.1 3481868-3483292 1425 - hypothetical protein-