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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori Shi169 (NC_017740) Location : 528124 - 574832 bp Size : 46709 bp GC content : 36.1 % GC bias (=GCregion - GCgenome) : -2.77 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_006225717.1 | 528124-529569 | 1446 | - | glutamine synthetase | Virulence |
2 | NA | YP_006225718.1 | 529706-531775 | 2070 | + | hypothetical protein | - |
3 | rplI | YP_006225719.1 | 531837-532286 | 450 | + | 50S ribosomal protein L9 | - |
4 | NA | YP_006225720.1 | 532290-532832 | 543 | + | ATP-dependent protease subunit HslV | - |
5 | hslU | YP_006225721.1 | 532841-534163 | 1323 | + | ATP-dependent protease ATP-binding subunit HslU | - |
6 | era | YP_006225722.1 | 534163-535068 | 906 | + | GTPase Era | - |
7 | NA | YP_006225723.1 | 535065-536057 | 993 | + | hypothetical protein | - |
8 | NA | YP_006225724.1 | 536127-536957 | 831 | - | hypothetical protein | - |
9 | NA | YP_006225725.1 | 537188-537535 | 348 | + | cag pathogenicity island protein Cag zeta | Virulence |
10 | NA | YP_006225726.1 | 537762-539207 | 1446 | + | cag pathogenicity island protein Cag delta | Virulence |
11 | NA | YP_006225727.1 | 539217-539726 | 510 | + | cag pathogenicity island protein (cag4) | Virulence |
12 | NA | YP_006225728.1 | 539843-542089 | 2247 | - | CAG pathogenicity island protein 5 | Virulence |
13 | NA | YP_006225729.1 | 542098-543090 | 993 | - | cag pathogenicity island protein cag alpha | Virulence |
14 | NA | YP_006225730.1 | 543095-543694 | 600 | - | cag pathogenicity island protein CagZ | Virulence |
15 | NA | YP_006225731.1 | 543707-543841 | 135 | - | hypothetical protein | - |
16 | NA | YP_006225732.1 | 543831-549374 | 5544 | - | cag pathogenicity island protein (cag7) | Virulence |
17 | NA | YP_006225733.1 | 549389-550957 | 1569 | - | cag pathogenicity island protein CagX | Virulence |
18 | NA | YP_006225734.1 | 551010-552617 | 1608 | - | cag pathogenicity island protein W | Virulence |
19 | NA | YP_006225735.1 | 552622-553380 | 759 | - | cag pathogenicity island protein CagV | Virulence |
20 | NA | YP_006225736.1 | 553656-554303 | 648 | + | cag pathogenicity island protein CagU | Virulence |
21 | NA | YP_006225737.1 | 554319-555161 | 843 | + | CAG pathogenicity island protein T | Virulence |
22 | NA | YP_006225738.1 | 555362-555961 | 600 | - | CAG pathogenicity island protein S | Virulence |
23 | NA | YP_006225739.1 | 556395-556532 | 138 | - | hypothetical protein | - |
24 | NA | YP_006225740.1 | 556665-556847 | 183 | + | hypothetical protein | - |
25 | NA | YP_006225741.1 | 556806-557093 | 288 | - | cag pathogenicity island protein R | - |
26 | NA | YP_006225742.1 | 557238-557393 | 156 | + | hypothetical protein | - |
27 | NA | YP_006225743.1 | 557726-557821 | 96 | - | hypothetical protein | - |
28 | NA | YP_006225744.1 | 558912-560042 | 1131 | + | cag pathogenicity island protein CagM | Virulence |
29 | NA | YP_006225745.1 | 560057-560977 | 921 | + | cag pathogenicity island protein CagN | Virulence |
30 | NA | YP_006225746.1 | 561060-561773 | 714 | - | cag pathogenicity island protein CagL | Virulence |
31 | NA | YP_006225747.1 | 561770-562909 | 1140 | - | cag pathogenicity island protein CagI | Virulence |
32 | NA | YP_006225748.1 | 562920-564032 | 1113 | - | cag island protein | Virulence |
33 | NA | YP_006225749.1 | 564034-564465 | 432 | - | cag pathogenicity island protein CagG | Virulence |
34 | NA | YP_006225750.1 | 564520-565326 | 807 | - | cag pathogenicity island protein CagF | Virulence |
35 | NA | YP_006225751.1 | 565328-568279 | 2952 | - | cag pathogenicity island protein CagE | Virulence |
36 | NA | YP_006225752.1 | 568288-568911 | 624 | - | cag pathogenicity island protein CagD | Virulence |
37 | NA | YP_006225753.1 | 568913-569260 | 348 | - | cag pathogenicity island protein C | Virulence |
38 | NA | YP_006225754.1 | 569428-569655 | 228 | - | cag pathogenicity island protein CagB | Virulence |
39 | NA | YP_006225755.1 | 570063-573623 | 3561 | + | cag pathogenicity island protein CagA | Virulence |
40 | NA | YP_006225756.1 | 573595-573738 | 144 | - | hypothetical protein | - |
41 | NA | YP_006225757.1 | 574065-574832 | 768 | - | glutamate racemase | - |