View cPAI - PAIs map

PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Cronobacter sakazakii ES15 (NC_017933)
Location : 3030220 - 3047231 bp
Size : 17012 bp
GC content : 48.4 %
GC bias (=GC_region - GC_genome) : -8.76 %

• Features

^*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No	Name	GenBank Accn	Location	Size(bp)	Strand	Product	Putative Virulence / Resistance^*
1	impK1	YP_006343898.1	3030220-3031563	1344	-	OmpA/MotB family protein 1	-
2	impJ1	YP_006343899.1	3031563-3032909	1347	-	type VI secretion protein	-
3	vasD2	YP_006343900.1	3032896-3033303	408	-	type VI secretion lipoprotein, VC_A0113 family 1	-
4	hcp2	YP_006343901.1	3033608-3034093	486	-	type VI secretion system effector, Hcp1 family 2	Virulence
5	impC2	YP_006343902.1	3034252-3035748	1497	-	type VI secretion protein EvpB	Virulence
6	NA	YP_006343903.1	3035771-3036301	531	-	type VI secretion protein	Virulence
7	NA	YP_006343904.1	3036391-3036552	162	-	fimbrial protein, truncated	-
8	NA	YP_006343905.1	3036583-3036714	132	+	fimbrial protein, truncated	-
9	fimD3	YP_006343906.1	3036972-3039572	2601	-	fimbrial biogenesis outer membrane usher protein	-
10	NA	YP_006343907.1	3039660-3040130	471	-	Gram-negative pili assembly chaperone	-
11	fimA2	YP_006343908.1	3040505-3041035	531	-	frimbrial protein	Virulence
12	clpB2	YP_006343909.1	3041099-3043792	2694	-	Clp ATPase chaperone protein ClpB	Virulence
13	impG	YP_006343910.1	3044323-3046203	1881	+	type VI secretion protein	Virulence
14	impH1	YP_006343911.1	3046203-3047231	1029	+	type VI secretion protein	-