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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Pectobacterium carotovorum PCC21 (NC_018525) Location : 2574610 - 2609649 bp Size : 35040 bp GC content : 55.5 % GC bias (=GCregion - GCgenome) : 3.31 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_006646917.1 | 2574610-2575032 | 423 | - | avirulence protein | Virulence |
2 | NA | YP_006646918.1 | 2575068-2579951 | 4884 | - | protein DspE | Virulence |
3 | NA | YP_006646919.1 | 2580126-2581607 | 1482 | + | type III effector protein | - |
4 | NA | YP_006646920.1 | 2581609-2581932 | 324 | + | HrpW-specific chaperone | - |
5 | NA | YP_006646921.1 | 2582572-2583900 | 1329 | + | hypothetical protein | - |
6 | NA | YP_006646922.1 | 2583913-2584866 | 954 | + | hypothetical protein | - |
7 | NA | YP_006646923.1 | 2585023-2586093 | 1071 | - | HrpN | - |
8 | NA | YP_006646924.1 | 2586238-2586585 | 348 | - | type III secretion protein | - |
9 | NA | YP_006646925.1 | 2586578-2586769 | 192 | - | type III secretion lipoprotein | Virulence |
10 | NA | YP_006646926.1 | 2586797-2588866 | 2070 | - | HrcC | Virulence |
11 | NA | YP_006646927.1 | 2588859-2589269 | 411 | - | type III secretion protein | - |
12 | NA | YP_006646928.1 | 2589280-2589504 | 225 | - | type III secretion protein | Virulence |
13 | NA | YP_006646929.1 | 2589651-2590250 | 600 | - | type III secretion protein | - |
14 | NA | YP_006646930.1 | 2590288-2590917 | 630 | - | type III secretion protein | - |
15 | NA | YP_006646931.1 | 2590914-2591681 | 768 | - | type III secretion protein | Virulence |
16 | NA | YP_006646932.1 | 2591688-2592059 | 372 | - | type III secretion protein | Virulence |
17 | NA | YP_006646933.1 | 2592129-2592335 | 207 | - | type III secretion protein | Virulence |
18 | NA | YP_006646934.1 | 2592682-2594277 | 1596 | + | EAL domain-containing protein | - |
19 | NA | YP_006646935.1 | 2594376-2595446 | 1071 | - | HrpS | Virulence |
20 | NA | YP_006646936.1 | 2595825-2596466 | 642 | - | two-component response regulator | Virulence |
21 | NA | YP_006646937.1 | 2596503-2597972 | 1470 | - | PAS/PAC sensor signal transduction histidine kinase | Virulence |
22 | NA | YP_006646938.1 | 2598214-2598759 | 546 | - | sigma factor | Virulence |
23 | NA | YP_006646939.1 | 2598811-2600295 | 1485 | + | type III secretion protein | Virulence |
24 | NA | YP_006646940.1 | 2600292-2602394 | 2103 | + | protein HrcV | Virulence |
25 | NA | YP_006646941.1 | 2602404-2603339 | 936 | + | type III secretion protein | Virulence |
26 | NA | YP_006646942.1 | 2603339-2604706 | 1368 | + | HrcN | Virulence |
27 | NA | YP_006646943.1 | 2604771-2604920 | 150 | - | hypothetical protein | - |
28 | NA | YP_006646944.1 | 2604920-2605132 | 213 | + | type III secretion protein | - |
29 | NA | YP_006646945.1 | 2605129-2605662 | 534 | + | type III secretion protein | - |
30 | NA | YP_006646946.1 | 2605659-2606831 | 1173 | + | type III secretion protein | - |
31 | NA | YP_006646947.1 | 2606828-2607481 | 654 | + | type III secretion system protein | Virulence |
32 | NA | YP_006646948.1 | 2607489-2607749 | 261 | + | type III secretion protein | Virulence |
33 | NA | YP_006646949.1 | 2607756-2608559 | 804 | + | type III secretion protein | Virulence |
34 | NA | YP_006646950.1 | 2608570-2609649 | 1080 | + | type III secretion protein | Virulence |