PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli 2009EL-2050 (NC_018650)
Location : 4164260 - 4198692 bp
Size : 34433 bp
GC content : 51.7 %
GC bias (=GCregion - GCgenome) : 0.98 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_006771681.1 4164260-4166401 2142 - hypothetical protein-
2NA YP_006771682.1 4166611-4167129 519 - hypothetical protein-
3NA YP_006771683.1 4167256-4167399 144 - hypothetical protein-
4NA YP_006771684.1 4167826-4168326 501 + hypothetical proteinVirulence
5NA YP_006771685.1 4168361-4168585 225 + hypothetical protein-
6NA YP_006771686.1 4168636-4170111 1476 + hypothetical proteinVirulence
7NA YP_006771687.1 4170118-4170531 414 + hypothetical protein-
8NA YP_006771688.1 4170535-4172385 1851 + type VI secretion system protein ImpGVirulence
9NA YP_006771689.1 4172349-4173431 1083 + hypothetical proteinVirulence
10NA YP_006771690.1 4173456-4174736 1281 + type VI secretion system protein ImpI-
11NA YP_006771691.1 4174733-4175257 525 + lipoprotein-
12NA YP_006771692.1 4175260-4176591 1332 + hypothetical proteinVirulence
13NA YP_006771693.1 4176596-4177357 762 + membrane protein Aec26-
14NA YP_006771694.1 4177366-4180125 2760 + ATP-dependent Clp proteinase ATP-binding subunitVirulence
15NA YP_006771695.1 4180122-4180865 744 + hypothetical protein-
16NA YP_006771696.1 4180870-4182285 1416 + hypothetical protein-
17NA YP_006771697.1 4182304-4185828 3525 + IcmF-like protein-
18NA YP_006771698.1 4185839-4187191 1353 + hypothetical protein-
19NA YP_006771699.1 4187215-4187697 483 + hypothetical protein-
20NA YP_006771700.1 4187741-4188655 915 + hypothetical protein-
21NA YP_006771701.1 4188665-4189144 480 + hypothetical protein-
22NA YP_006771702.1 4189281-4190066 786 - aminopeptidase-
23tRNA-Asp - 4190393-4190469 77 - tRNA-Asp-
24NA YP_006771703.1 4190602-4191333 732 - DNA polymerase III subunit epsilon-
25rnhA YP_006771704.1 4191398-4191865 468 + ribonuclease H-
26NA YP_006771705.1 4191862-4192584 723 - S-adenosyl-L-methionine-dependent methyltransferase-
27NA YP_006771706.1 4192618-4193373 756 + hydroxyacylglutathione hydrolase-
28mltD YP_006771707.1 4193445-4194803 1359 + membrane-bound lytic murein transglycosylase D-
29NA YP_006771708.1 4194851-4195621 771 - S-adenosyl-L-methionine-dependent methyltransferase-
30NA YP_006771709.1 4195699-4196499 801 - hypothetical protein-
31NA YP_006771710.1 4196740-4197654 915 + LysR family transcriptional regulator-
32dkgB YP_006771711.1 4197651-4198454 804 - 2,5-diketo-D-gluconate reductase B-
33tRNA-Asp - 4198616-4198692 77 - tRNA-Asp-


tRNA-Asp tRNA-Asp