Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli 2009EL-2050 (NC_018650) Location : 4714553 - 4774464 bp Size : 59912 bp GC content : 49.7 % GC bias (=GCregion - GCgenome) : -1.04 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | tRNA-Phe | - | 4714553-4714628 | 76 | + | tRNA-Phe | - |
2 | NA | YP_006772189.1 | 4714826-4716088 | 1263 | + | Prophage integrase | - |
3 | NA | YP_006772190.1 | 4720418-4720762 | 345 | + | transposase, IS110 family protein | - |
4 | NA | YP_006772191.1 | 4721091-4721339 | 249 | - | hypothetical protein | - |
5 | NA | YP_006772192.1 | 4721406-4722167 | 762 | + | hypothetical protein | Virulence |
6 | NA | YP_006772193.1 | 4722528-4726385 | 3858 | + | Serine protease pet precursor (Plasmid-encoded toxin pet) | Virulence |
7 | NA | YP_006772194.1 | 4726432-4727013 | 582 | + | hypothetical protein | Virulence |
8 | NA | YP_006772195.1 | 4727205-4728818 | 1614 | - | transposase | - |
9 | NA | YP_006772196.1 | 4728849-4729199 | 351 | - | hypothetical protein | - |
10 | NA | YP_006772197.1 | 4729196-4729630 | 435 | - | hypothetical protein | - |
11 | NA | YP_006772198.1 | 4729964-4730371 | 408 | - | protein encoded within IS | - |
12 | NA | YP_006772199.1 | 4730437-4730940 | 504 | + | transposase | - |
13 | NA | YP_006772200.1 | 4732169-4732594 | 426 | + | transposase OrfA from plasmid origin | - |
14 | NA | YP_006772201.1 | 4732591-4732842 | 252 | + | IS66 transposase | - |
15 | NA | YP_006772202.1 | 4732868-4733194 | 327 | + | transposase ORF A, IS629, IS3 family protein | - |
16 | NA | YP_006772203.1 | 4734265-4735788 | 1524 | + | reverse transcriptase-like protein from prophage or plasmid | Virulence |
17 | NA | YP_006772204.1 | 4736753-4738948 | 2196 | - | Ferric aerobactin receptor | Virulence |
18 | NA | YP_006772205.1 | 4738954-4740291 | 1338 | - | L-lysine 6-monooxygenase (Lysine N(6)-hydroxylase) | Virulence |
19 | NA | YP_006772206.1 | 4740288-4742030 | 1743 | - | Aerobactin siderophore biosynthesis protein | Virulence |
20 | NA | YP_006772207.1 | 4742030-4742977 | 948 | - | siderophore biosynthesis protein | Virulence |
21 | NA | YP_006772208.1 | 4742978-4744759 | 1782 | - | aerobactin siderophore biosynthesis protein | Virulence |
22 | NA | YP_006772209.1 | 4744838-4746031 | 1194 | + | membrane transport protein, major facilitator superfamily | Virulence |
23 | NA | YP_006772210.1 | 4747244-4747411 | 168 | + | hypothetical protein | - |
24 | NA | YP_006772211.1 | 4747398-4747583 | 186 | - | transposase | - |
25 | NA | YP_006772212.1 | 4747647-4748789 | 1143 | + | transposase, IS110 family protein | - |
26 | NA | YP_006772213.1 | 4748829-4749719 | 891 | - | transposase ORFB, IS629, IS3 family protein | - |
27 | NA | YP_006772214.1 | 4749716-4750042 | 327 | - | transposase ORF A, IS629, IS3 family protein | - |
28 | NA | YP_006772215.1 | 4750271-4750555 | 285 | - | transposase ORF1, IS66 family protein | - |
29 | NA | YP_006772216.1 | 4750620-4751744 | 1125 | - | transposase | - |
30 | NA | YP_006772217.1 | 4751965-4752474 | 510 | + | hypothetical protein | - |
31 | NA | YP_006772218.1 | 4752537-4752755 | 219 | + | transposase | - |
32 | NA | YP_006772219.1 | 4752906-4757024 | 4119 | - | Serine protease pic precursor (ShMu) | Virulence |
33 | NA | YP_006772220.1 | 4757189-4757560 | 372 | - | transposase | - |
34 | NA | YP_006772221.1 | 4757752-4758933 | 1182 | - | reverse transcriptase-like protein from prophage or plasmid | Virulence |
35 | NA | YP_006772222.1 | 4759052-4759276 | 225 | - | reverse transcriptase-like protein | - |
36 | NA | YP_006772223.1 | 4760347-4760673 | 327 | - | transposase ORF A, IS629, IS3 family protein | - |
37 | NA | YP_006772224.1 | 4761197-4761670 | 474 | + | antirestriction protein | Virulence |
38 | NA | YP_006772225.1 | 4761686-4762162 | 477 | + | RADC family DNA repair protein | Virulence |
39 | NA | YP_006772226.1 | 4762249-4762470 | 222 | + | hypothetical protein | Virulence |
40 | NA | YP_006772227.1 | 4762550-4762927 | 378 | + | antitoxin of the YeeV-YeeU toxin-antitoxin system | Virulence |
41 | NA | YP_006772228.1 | 4762974-4763351 | 378 | + | hypothetical protein | Virulence |
42 | NA | YP_006772229.1 | 4763348-4763836 | 489 | + | hypothetical protein | Virulence |
43 | NA | YP_006772230.1 | 4763856-4764053 | 198 | + | hypothetical protein | Virulence |
44 | NA | YP_006772231.1 | 4764138-4764980 | 843 | + | hypothetical protein | Virulence |
45 | NA | YP_006772232.1 | 4765729-4767267 | 1539 | + | DNA-binding transcriptional activator CadC | - |
46 | cadB | YP_006772233.1 | 4767633-4768967 | 1335 | + | lysine/cadaverine antiporter | Virulence |
47 | NA | YP_006772234.1 | 4769047-4771194 | 2148 | + | lysine decarboxylase CadA | Virulence |
48 | NA | YP_006772235.1 | 4771253-4772710 | 1458 | + | transporter | - |
49 | NA | YP_006772236.1 | 4772947-4774464 | 1518 | + | lysyl-tRNA synthetase | Virulence |