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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli 2009EL-2050 (NC_018650) Location : 825343 - 888520 bp Size : 63178 bp GC content : 51.7 % GC bias (=GCregion - GCgenome) : 0.95 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_006768488.1 | 825343-826167 | 825 | + | hypothetical protein | - |
2 | NA | YP_006768489.1 | 826179-826739 | 561 | + | transcriptional regulator | - |
3 | NA | YP_006768490.1 | 826770-827840 | 1071 | + | hypothetical protein | - |
4 | NA | YP_006768491.1 | 827837-828916 | 1080 | + | hypothetical protein | - |
5 | NA | YP_006768492.1 | 828951-830123 | 1173 | - | hypothetical protein | - |
6 | NA | YP_006768493.1 | 830123-830371 | 249 | - | hypothetical protein | - |
7 | NA | YP_006768494.1 | 830403-831317 | 915 | - | hypothetical protein | - |
8 | NA | YP_006768495.1 | 831314-833002 | 1689 | - | acyl-CoA synthetase | - |
9 | NA | YP_006768496.1 | 833406-834548 | 1143 | + | DNA-binding transcriptional regulator | - |
10 | NA | YP_006768497.1 | 834555-835319 | 765 | - | DNA-binding transcriptional regulator GlcC | - |
11 | NA | YP_006768498.1 | 835570-837069 | 1500 | + | glycolate oxidase subunit GlcD | - |
12 | glcE | YP_006768499.1 | 837069-838121 | 1053 | + | glycolate oxidase FAD binding subunit | - |
13 | glcF | YP_006768500.1 | 838132-839355 | 1224 | + | glycolate oxidase iron-sulfur subunit | - |
14 | NA | YP_006768501.1 | 839360-839764 | 405 | + | hypothetical protein | - |
15 | NA | YP_006768502.1 | 839786-841957 | 2172 | + | malate synthase G | - |
16 | NA | YP_006768503.1 | 842313-843995 | 1683 | + | glycolate transporter | - |
17 | NA | YP_006768504.1 | 844121-844330 | 210 | - | hypothetical protein | - |
18 | NA | YP_006768505.1 | 844613-849046 | 4434 | + | inner membrane lipoprotein | Virulence |
19 | NA | YP_006768506.1 | 849186-849995 | 810 | + | bifunctional prepilin leader peptidase/methylase | - |
20 | NA | YP_006768507.1 | 850061-850471 | 411 | + | hypothetical protein | - |
21 | NA | YP_006768508.1 | 850489-851448 | 960 | + | type II secretion protein GspC | Virulence |
22 | NA | YP_006768509.1 | 851478-853538 | 2061 | + | general secretion pathway protein D | Virulence |
23 | NA | YP_006768510.1 | 853538-855031 | 1494 | + | general secretion pathway protein E | Virulence |
24 | NA | YP_006768511.1 | 855031-856254 | 1224 | + | General secretion pathway protein F | Virulence |
25 | NA | YP_006768512.1 | 856271-856726 | 456 | + | general secretion pathway protein G | Virulence |
26 | NA | YP_006768513.1 | 856730-857293 | 564 | + | general secretion pathway protein H | Virulence |
27 | NA | YP_006768514.1 | 857290-857661 | 372 | + | type II secretion protein | Virulence |
28 | NA | YP_006768515.1 | 857658-858257 | 600 | + | general secretion pathway protein J | Virulence |
29 | NA | YP_006768516.1 | 858260-859237 | 978 | + | type II secretion protein (GspK-like) | Virulence |
30 | NA | YP_006768517.1 | 859234-860412 | 1179 | + | GspL-like protein | Virulence |
31 | NA | YP_006768518.1 | 860414-860950 | 537 | + | general secretion pathway protein YghD | Virulence |
32 | NA | YP_006768519.1 | 861231-862073 | 843 | - | hypothetical protein | Virulence |
33 | NA | YP_006768520.1 | 862158-862580 | 423 | - | hypothetical protein | - |
34 | NA | YP_006768521.1 | 862577-862954 | 378 | - | toxin of the YeeV-YeeU toxin-antitoxin system | Virulence |
35 | NA | YP_006768522.1 | 863001-863378 | 378 | - | antitoxin of the YeeV-YeeU toxin-antitoxin system | Virulence |
36 | NA | YP_006768523.1 | 863458-863679 | 222 | - | hypothetical protein | Virulence |
37 | NA | YP_006768524.1 | 863766-864242 | 477 | - | DNA repair protein | Virulence |
38 | NA | YP_006768525.1 | 864258-864731 | 474 | - | hypothetical protein | Virulence |
39 | NA | YP_006768526.1 | 865033-865851 | 819 | - | hypothetical protein | Virulence |
40 | NA | YP_006768527.1 | 865951-866184 | 234 | - | hypothetical protein | Virulence |
41 | NA | YP_006768528.1 | 866263-866718 | 456 | - | hypothetical protein | Virulence |
42 | NA | YP_006768529.1 | 866794-869310 | 2517 | - | membrane protein, yeeR | Virulence |
43 | NA | YP_006768530.1 | 869431-872550 | 3120 | - | antigen 43 (Ag43) phase-variable biofilm formation autotransporter, CP4-44 prophage | Virulence |
44 | NA | YP_006768531.1 | 872884-873756 | 873 | - | GTPase | Virulence |
45 | NA | YP_006768532.1 | 873866-874885 | 1020 | - | hypothetical protein | Virulence |
46 | NA | YP_006768533.1 | 875866-876054 | 189 | + | hypothetical protein | - |
47 | NA | YP_006768534.1 | 876380-876952 | 573 | - | hypothetical protein | Virulence |
48 | NA | YP_006768535.1 | 877038-877244 | 207 | - | Prophage CP4-57 regulatory protein | Virulence |
49 | NA | YP_006768536.1 | 877943-878155 | 213 | + | hemolysin expression-modulating protein | Virulence |
50 | NA | YP_006768537.1 | 878772-879341 | 570 | + | hypothetical protein | Virulence |
51 | NA | YP_006768538.1 | 879509-879892 | 384 | + | hypothetical protein | Virulence |
52 | NA | YP_006768539.1 | 879882-880301 | 420 | + | hypothetical protein | Virulence |
53 | NA | YP_006768540.1 | 880307-880489 | 183 | + | hypothetical protein | - |
54 | NA | YP_006768541.1 | 880610-881233 | 624 | + | hypothetical protein | Virulence |
55 | NA | YP_006768542.1 | 881329-881562 | 234 | + | hypothetical protein | Virulence |
56 | NA | YP_006768543.1 | 881615-881806 | 192 | - | hypothetical protein | - |
57 | NA | YP_006768544.1 | 882313-882810 | 498 | + | hypothetical protein | - |
58 | NA | YP_006768545.1 | 882832-884193 | 1362 | + | hypothetical protein | Virulence |
59 | NA | YP_006768546.1 | 884295-885539 | 1245 | + | hypothetical protein | - |
60 | NA | YP_006768547.1 | 885856-887520 | 1665 | + | UvrD/REP helicase | - |
61 | NA | YP_006768548.1 | 887582-887890 | 309 | + | hypothetical protein | - |
62 | NA | YP_006768549.1 | 887945-888172 | 228 | + | transcriptional regulator IbrB | - |
63 | NA | YP_006768550.1 | 888251-888520 | 270 | + | transcriptional regulator | - |