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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli 2011C-3493 (NC_018658) Location : 4735703 - 4794239 bp Size : 58537 bp GC content : 49.5 % GC bias (=GCregion - GCgenome) : -1.18 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | tRNA-Phe | - | 4735703-4735778 | 76 | + | tRNA-Phe | - |
| 2 | NA | YP_006781250.1 | 4735976-4737238 | 1263 | + | Prophage integrase | - |
| 3 | NA | YP_006781251.1 | 4741547-4741912 | 366 | + | hypothetical protein | - |
| 4 | NA | YP_006781252.1 | 4741909-4742163 | 255 | - | truncated transposase | - |
| 5 | NA | YP_006781253.1 | 4742241-4742489 | 249 | - | hypothetical protein | - |
| 6 | NA | YP_006781254.1 | 4742556-4743317 | 762 | + | hypothetical protein | Virulence |
| 7 | NA | YP_006781255.1 | 4743678-4747535 | 3858 | + | Serine protease pet precursor (Plasmid-encoded toxin pet) | Virulence |
| 8 | NA | YP_006781256.1 | 4747582-4748163 | 582 | + | hypothetical protein | Virulence |
| 9 | NA | YP_006781257.1 | 4748355-4749758 | 1404 | - | transposase | - |
| 10 | NA | YP_006781258.1 | 4749857-4750264 | 408 | - | protein encoded within IS | - |
| 11 | NA | YP_006781259.1 | 4750330-4750833 | 504 | + | transposase | - |
| 12 | NA | YP_006781260.1 | 4752062-4752487 | 426 | + | transposase OrfA from plasmid origin | - |
| 13 | NA | YP_006781261.1 | 4752484-4752735 | 252 | + | IS66 transposase | - |
| 14 | NA | YP_006781262.1 | 4752761-4753087 | 327 | + | IS629 orfA | - |
| 15 | NA | YP_006781263.1 | 4754157-4755680 | 1524 | + | reverse transcriptase-like protein from prophage or plasmid | Virulence |
| 16 | NA | YP_006781264.1 | 4756645-4758840 | 2196 | - | Ferric aerobactin receptor | Virulence |
| 17 | NA | YP_006781265.1 | 4758846-4760183 | 1338 | - | L-lysine 6-monooxygenase (Lysine N(6)-hydroxylase) | Virulence |
| 18 | NA | YP_006781266.1 | 4760180-4761922 | 1743 | - | Aerobactin siderophore biosynthesis protein | Virulence |
| 19 | NA | YP_006781267.1 | 4761922-4762869 | 948 | - | siderophore biosynthesis protein | Virulence |
| 20 | NA | YP_006781268.1 | 4762870-4764651 | 1782 | - | aerobactin siderophore biosynthesis protein | Virulence |
| 21 | NA | YP_006781269.1 | 4764730-4765923 | 1194 | + | membrane transport protein, major facilitator superfamily | Virulence |
| 22 | NA | YP_006781270.1 | 4767136-4767303 | 168 | + | hypothetical protein | - |
| 23 | NA | YP_006781271.1 | 4767290-4767475 | 186 | - | transposase | - |
| 24 | NA | YP_006781272.1 | 4767539-4768579 | 1041 | + | transposase, IS110 family protein | - |
| 25 | NA | YP_006781273.1 | 4769094-4769621 | 528 | + | hypothetical protein | Virulence |
| 26 | NA | YP_006781274.1 | 4769978-4770331 | 354 | - | transposase ORF1, IS66 family protein | - |
| 27 | NA | YP_006781275.1 | 4770396-4771520 | 1125 | - | transposase | - |
| 28 | NA | YP_006781276.1 | 4771741-4772250 | 510 | + | hypothetical protein | - |
| 29 | NA | YP_006781277.1 | 4772313-4772531 | 219 | + | transposase | - |
| 30 | NA | YP_006781278.1 | 4772682-4776800 | 4119 | - | Serine protease pic precursor (ShMu) | Virulence |
| 31 | NA | YP_006781279.1 | 4776965-4777351 | 387 | - | transposase | - |
| 32 | NA | YP_006781280.1 | 4777528-4779051 | 1524 | - | reverse transcriptase-like protein from prophage or plasmid | Virulence |
| 33 | NA | YP_006781281.1 | 4780122-4780448 | 327 | - | transposase ORF A, IS629, IS3 family protein | - |
| 34 | NA | YP_006781282.1 | 4780972-4781445 | 474 | + | antirestriction protein | Virulence |
| 35 | NA | YP_006781283.1 | 4781461-4781937 | 477 | + | RADC family DNA repair protein | Virulence |
| 36 | NA | YP_006781284.1 | 4782024-4782245 | 222 | + | hypothetical protein | Virulence |
| 37 | NA | YP_006781285.1 | 4782325-4782702 | 378 | + | antitoxin of the YeeV-YeeU toxin-antitoxin system, CP4-44 prophage | Virulence |
| 38 | NA | YP_006781286.1 | 4782749-4783126 | 378 | + | hypothetical protein | Virulence |
| 39 | NA | YP_006781287.1 | 4783123-4783611 | 489 | + | hypothetical protein | Virulence |
| 40 | NA | YP_006781288.1 | 4783631-4783828 | 198 | + | hypothetical protein | Virulence |
| 41 | NA | YP_006781289.1 | 4783913-4784755 | 843 | + | hypothetical protein | Virulence |
| 42 | NA | YP_006781290.1 | 4785504-4787042 | 1539 | + | DNA-binding transcriptional activator CadC | - |
| 43 | cadB | YP_006781291.1 | 4787408-4788742 | 1335 | + | lysine/cadaverine antiporter | Virulence |
| 44 | NA | YP_006781292.1 | 4788822-4790969 | 2148 | + | lysine decarboxylase CadA | Virulence |
| 45 | NA | YP_006781293.1 | 4791028-4792485 | 1458 | + | transporter | - |
| 46 | NA | YP_006781294.1 | 4792722-4794239 | 1518 | + | lysyl-tRNA synthetase | Virulence |