PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Enterobacteriaceae bacterium FGI 57 (NC_020063)
Location : 3769960 - 3805655 bp
Size : 35696 bp
GC content : 52.6 %
GC bias (=GCregion - GCgenome) : -1.37 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_007341736.1 3769960-3772194 2235 - Rhs element Vgr protein-
2NA YP_007341737.1 3772410-3772928 519 - type VI secretion system effector, Hcp1 family-
3NA YP_007341738.1 3773631-3774131 501 + type VI secretion protein, VC_A0107 familyVirulence
4NA YP_007341739.1 3774152-3775633 1482 + type VI secretion protein, EvpB/VC_A0108 familyVirulence
5NA YP_007341740.1 3775636-3776064 429 + type VI secretion system lysozyme-related protein-
6NA YP_007341741.1 3776072-3777892 1821 + type VI secretion protein, VC_A0110 family-
7NA YP_007341742.1 3777859-3778902 1044 + type VI secretion protein, VC_A0111 family-
8NA YP_007341743.1 3778907-3780205 1299 + type VI secretion system FHA domain protein-
9NA YP_007341744.1 3780202-3780735 534 + type VI secretion lipoprotein, VC_A0113 family-
10NA YP_007341745.1 3780738-3782081 1344 + type VI secretion protein, VC_A0114 familyVirulence
11NA YP_007341746.1 3782086-3782904 819 + type IV / VI secretion system protein, DotU family-
12NA YP_007341747.1 3782917-3785592 2676 + type VI secretion ATPase, ClpV1 familyVirulence
13NA YP_007341748.1 3785589-3786296 708 + type VI secretion-associated protein, VC_A0118 family-
14NA YP_007341749.1 3786302-3787711 1410 + type VI secretion-associated protein, VC_A0119 family-
15NA YP_007341750.1 3787730-3791251 3522 + type VI secretion protein IcmF-
16NA YP_007341751.1 3791386-3792294 909 + hypothetical protein-
17NA YP_007341752.1 3792307-3792828 522 + Protein of unknown function (DUF1240)-
18NA - 3792825-3793034 210 + --
19NA YP_007341753.1 3793109-3793588 480 + type VI secretion system effector, Hcp1 family-
20NA YP_007341754.1 3793585-3794919 1335 + hypothetical protein-
21NA YP_007341755.1 3795117-3795917 801 - hypothetical protein-
22tRNA-Asp - 3796164-3796240 77 - tRNA-Asp-
23NA YP_007341756.1 3796371-3797111 741 - DNA polymerase III, epsilon subunit-
24NA YP_007341757.1 3797166-3797633 468 + ribonuclease HI-
25NA YP_007341758.1 3797630-3798352 723 - methylase involved in ubiquinone/menaquinone biosynthesis-
26NA YP_007341759.1 3798385-3799140 756 + hydroxyacylglutathione hydrolase-
27NA YP_007341760.1 3799212-3800579 1368 + soluble lytic murein transglycosylase-like protein-
28NA YP_007341761.1 3800627-3801397 771 - methylase involved in ubiquinone/menaquinone biosynthesis-
29NA YP_007341762.1 3801476-3802258 783 - hypothetical protein-
30NA YP_007341763.1 3802423-3803598 1176 - arabinose efflux permease family protein-
31NA YP_007341764.1 3803704-3804615 912 + transcriptional regulator-
32NA YP_007341765.1 3804612-3805415 804 - aldo/keto reductase, diketogulonate reductase-
33tRNA-Asp - 3805579-3805655 77 - tRNA-Asp-


tRNA-Asp tRNA-Asp