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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli APEC O78 (NC_020163) Location : 3719733 - 3741330 bp Size : 21598 bp GC content : 36.1 % GC bias (=GCregion - GCgenome) : -14.62 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_007382733.1 | 3719733-3720365 | 633 | + | yqeH protein | - |
2 | NA | YP_007382734.1 | 3720699-3721508 | 810 | + | transcriptional regulator | Virulence |
3 | NA | YP_007382735.1 | 3721501-3721983 | 483 | + | hypothetical protein | Virulence |
4 | NA | YP_007382736.1 | 3722016-3722096 | 81 | - | hypothetical protein | - |
5 | NA | YP_007382737.1 | 3722132-3722569 | 438 | - | hypothetical protein | - |
6 | NA | YP_007382738.1 | 3722751-3723188 | 438 | + | hypothetical protein | - |
7 | NA | YP_007382739.1 | 3723466-3723957 | 492 | + | chaperone | - |
8 | NA | YP_007382740.1 | 3724292-3725188 | 897 | + | transcriptional regulator | - |
9 | NA | YP_007382741.1 | 3725113-3726018 | 906 | - | IS2 transposase TnpB | - |
10 | NA | YP_007382742.1 | 3725976-3726341 | 366 | - | IS2 repressor TnpA | - |
11 | NA | YP_007382743.1 | 3726543-3727004 | 462 | + | transcriptional regulator | - |
12 | NA | YP_007382744.1 | 3727575-3727949 | 375 | + | putative peptidoglycan binding protein | Virulence |
13 | NA | YP_007382745.1 | 3727994-3728437 | 444 | - | hypothetical protein | - |
14 | NA | YP_007382746.1 | 3728471-3728626 | 156 | - | response regulator protein | - |
15 | NA | YP_007382747.1 | 3728847-3729278 | 432 | - | hypothetical protein | - |
16 | NA | YP_007382748.1 | 3729495-3730076 | 582 | - | hypothetical protein | - |
17 | NA | YP_007382749.1 | 3730092-3730826 | 735 | - | type III secretion system lipoprotein EprK | Virulence |
18 | NA | YP_007382750.1 | 3730867-3731082 | 216 | - | type III secretion protein EprJ | - |
19 | NA | YP_007382751.1 | 3731259-3731414 | 156 | - | type III secretion protein EprI | Virulence |
20 | NA | YP_007382752.1 | 3731428-3732609 | 1182 | - | type III secretion EprH protein | Virulence |
21 | NA | YP_007382753.1 | 3732867-3733367 | 501 | + | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | - |
22 | NA | YP_007382754.1 | 3733369-3733662 | 294 | + | hypothetical protein | Virulence |
23 | NA | YP_007382755.1 | 3733724-3734086 | 363 | - | type III secretion system protein SpaS | Virulence |
24 | NA | YP_007382756.1 | 3734113-3734280 | 168 | - | type III secretion system protein | - |
25 | NA | YP_007382757.1 | 3734277-3734873 | 597 | - | type III secretion system protein SpaS | - |
26 | NA | YP_007382758.1 | 3734882-3735649 | 768 | - | type III secretion protein EpaR | Virulence |
27 | NA | YP_007382759.1 | 3735651-3735911 | 261 | - | type III secretion protein EpaQ | Virulence |
28 | spaP | YP_007382760.1 | 3735921-3736586 | 666 | - | type III secretion system protein SpaP | Virulence |
29 | NA | YP_007382761.1 | 3736576-3737523 | 948 | - | type III secretion system protein SpaO | Virulence |
30 | NA | YP_007382762.1 | 3737523-3737870 | 348 | - | protein EivJ | Virulence |
31 | NA | YP_007382763.1 | 3737933-3738286 | 354 | - | type III secretion system protein | Virulence |
32 | NA | YP_007382764.1 | 3738283-3738396 | 114 | - | hypothetical protein | - |
33 | NA | YP_007382765.1 | 3738414-3738830 | 417 | - | type III secretion apparatus protein | Virulence |
34 | NA | YP_007382766.1 | 3740144-3740671 | 528 | - | type III secretion system protein InvA | Virulence |
35 | NA | YP_007382767.1 | 3740674-3740805 | 132 | - | protein EivF | Virulence |
36 | NA | YP_007382768.1 | 3741151-3741330 | 180 | - | hypothetical protein | - |