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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Salmonella enterica Ty21a (NC_021176) Location : 2620356 - 2687428 bp Size : 67073 bp GC content : 51.6 % GC bias (=GCregion - GCgenome) : -0.44 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_007926837.1 | 2620356-2620763 | 408 | + | periplasmic protein | - |
2 | NA | YP_007926838.1 | 2621088-2621807 | 720 | + | outer membrane adhesin | - |
3 | NA | YP_007926839.1 | 2622770-2623387 | 618 | - | hypothetical protein | - |
4 | NA | YP_007926840.1 | 2623527-2623982 | 456 | - | transcriptional regulator | - |
5 | NA | YP_007926841.1 | 2624115-2625194 | 1080 | - | putative fimbrail protein | - |
6 | NA | YP_007926842.1 | 2625217-2627904 | 2688 | - | outer membrane fimbrial user protein | - |
7 | NA | YP_007926843.1 | 2628013-2628588 | 576 | - | putative fimbrial subunit | Virulence |
8 | NA | YP_007926844.1 | 2628639-2629349 | 711 | - | putative fimbrial protein | - |
9 | NA | YP_007926845.1 | 2630564-2630941 | 378 | + | hypothetical protein | - |
10 | NA | YP_007926846.1 | 2631000-2631167 | 168 | - | hypothetical protein | - |
11 | NA | YP_007926847.1 | 2631487-2632431 | 945 | - | LysR-family transcriptional regulator SinR | - |
12 | NA | YP_007926848.1 | 2632637-2632768 | 132 | - | hypothetical protein | - |
13 | NA | YP_007926849.1 | 2632909-2633169 | 261 | - | hypothetical protein | - |
14 | NA | YP_007926850.1 | 2633249-2634070 | 822 | - | hypothetical protein | Virulence |
15 | NA | YP_007926851.1 | 2634478-2634948 | 471 | - | putative fimbrial structural subunit | - |
16 | NA | YP_007926852.1 | 2634970-2637480 | 2511 | - | outer-membrane fimbrial usher protein | Virulence |
17 | NA | YP_007926853.1 | 2637504-2638220 | 717 | - | periplasmic fimbrial chaperone protein | Virulence |
18 | NA | YP_007926854.1 | 2638512-2638817 | 306 | - | lipoprotein | - |
19 | NA | YP_007926855.1 | 2638950-2639444 | 495 | - | lipoprotein | - |
20 | NA | YP_007926856.1 | 2640200-2640481 | 282 | - | hypothetical protein | - |
21 | NA | YP_007926857.1 | 2640707-2640904 | 198 | - | putative transposase | - |
22 | NA | YP_007926858.1 | 2641092-2641262 | 171 | + | hypothetical protein | - |
23 | NA | YP_007926859.1 | 2641332-2641775 | 444 | - | hypothetical protein | - |
24 | NA | YP_007926860.1 | 2642116-2644647 | 2532 | - | Rhs-family protein | - |
25 | NA | YP_007926861.1 | 2644758-2645009 | 252 | + | hypothetical protein | - |
26 | NA | YP_007926862.1 | 2645055-2645732 | 678 | - | hypothetical protein | - |
27 | NA | YP_007926863.1 | 2645735-2649799 | 4065 | - | Rhs-family protein | - |
28 | NA | YP_007926864.1 | 2649818-2650264 | 447 | - | hypothetical protein | - |
29 | NA | YP_007926865.1 | 2650288-2652477 | 2190 | - | Rhs-family protein | - |
30 | NA | YP_007926866.1 | 2652840-2652947 | 108 | - | hypothetical protein | - |
31 | NA | YP_007926867.1 | 2652955-2653392 | 438 | - | conserved hypothetical pathogenicity island protein | - |
32 | NA | YP_007926868.1 | 2653419-2653805 | 387 | - | putative secreted protein | - |
33 | NA | YP_007926869.1 | 2653963-2654424 | 462 | - | hypothetical protein | - |
34 | NA | YP_007926870.1 | 2654409-2654879 | 471 | - | hypothetical protein | - |
35 | NA | YP_007926871.1 | 2654922-2655689 | 768 | - | putative cytoplasmic protein | - |
36 | NA | YP_007926872.1 | 2655689-2657677 | 1989 | - | type VI secretion protein IcmF | - |
37 | NA | YP_007926873.1 | 2657574-2659550 | 1977 | - | putative inner membrane protein | - |
38 | NA | YP_007926874.1 | 2659787-2660281 | 495 | - | hypothetical protein | - |
39 | NA | YP_007926875.1 | 2660313-2661062 | 750 | - | hypothetical protein | - |
40 | NA | YP_007926876.1 | 2661067-2662368 | 1302 | - | hypothetical protein | - |
41 | NA | YP_007926877.1 | 2662365-2663708 | 1344 | - | type VI secretion protein | - |
42 | NA | YP_007926878.1 | 2663712-2664248 | 537 | - | lipoprotein | - |
43 | NA | YP_007926879.1 | 2664315-2664800 | 486 | - | hemolysin-coregulated protein | Virulence |
44 | NA | YP_007926880.1 | 2665037-2665462 | 426 | - | hypothetical protein | - |
45 | NA | YP_007926881.1 | 2665434-2665835 | 402 | - | hypothetical protein | - |
46 | NA | YP_007926882.1 | 2667420-2667962 | 543 | - | type VI secretion protein, VC_A0107 family | Virulence |
47 | NA | YP_007926883.1 | 2668026-2668316 | 291 | - | hypothetical protein | - |
48 | NA | YP_007926884.1 | 2668402-2671065 | 2664 | - | ClpB-like protein | Virulence |
49 | NA | YP_007926885.1 | 2671433-2672335 | 903 | + | hypothetical protein | - |
50 | NA | YP_007926886.1 | 2672322-2673146 | 825 | + | hypothetical protein | - |
51 | NA | YP_007926887.1 | 2673143-2673637 | 495 | + | putative cytoplasmic protein | - |
52 | NA | YP_007926888.1 | 2673653-2675536 | 1884 | + | hypothetical protein | Virulence |
53 | NA | YP_007926889.1 | 2675533-2676528 | 996 | + | hypothetical protein | - |
54 | tRNA-Asp | - | 2677913-2677989 | 77 | - | tRNA-Asp | - |
55 | NA | YP_007926890.1 | 2678123-2678863 | 741 | - | DNA polymerase III subunit epsilon | - |
56 | rnhA | YP_007926891.1 | 2678918-2679385 | 468 | + | ribonuclease H | - |
57 | NA | YP_007926892.1 | 2679382-2680104 | 723 | - | putative methyltransferase | - |
58 | NA | YP_007926893.1 | 2680139-2680894 | 756 | + | hydroxyacylglutathione hydrolase | - |
59 | mltD | YP_007926894.1 | 2681113-2682333 | 1221 | + | membrane-bound lytic murein transglycosylase D | - |
60 | NA | YP_007926895.1 | 2682389-2683159 | 771 | - | putative methyltransferase in menaquinone/biotin biosynthesis | - |
61 | NA | YP_007926896.1 | 2683237-2684037 | 801 | - | hypothetical protein | - |
62 | NA | YP_007926897.1 | 2684169-2685344 | 1176 | - | putative drug efflux protein | - |
63 | NA | YP_007926898.1 | 2685449-2686363 | 915 | + | transcriptional regulator | - |
64 | dkgB | YP_007926899.1 | 2686384-2687187 | 804 | - | 2,5-diketo-D-gluconate reductase B | - |
65 | tRNA-Asp | - | 2687352-2687428 | 77 | - | tRNA-Asp | - |