PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Salmonella enterica 41578 (NC_021810)
Location : 2095508 - 2134054 bp
Size : 38547 bp
GC content : 53.4 %
GC bias (=GCregion - GCgenome) : 1.18 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Asp - 2095508-2095584 77 + tRNA-Asp-
2dkgB YP_008246140.1 2095749-2096552 804 + 2,5-diketo-D-gluconate reductase B-
3NA YP_008246141.1 2096573-2097487 915 - LysR family transcriptional regulator-
4NA YP_008246142.1 2097592-2098767 1176 + putative drug efflux protein-
5NA YP_008246143.1 2098899-2099699 801 + hypothetical protein-
6NA YP_008246144.1 2099777-2100547 771 + SAM-dependent methyltransferase-
7mltD YP_008246145.1 2100603-2101970 1368 - membrane-bound lytic murein transglycosylase D-
8NA YP_008246146.1 2102042-2102797 756 - hydroxyacylglutathione hydrolase-
9NA YP_008246147.1 2102832-2103554 723 + hypothetical protein-
10rnhA YP_008246148.1 2103551-2104018 468 - ribonuclease H-
11NA YP_008246149.1 2104082-2104813 732 + DNA polymerase III subunit epsilon-
12tRNA-Asp - 2104947-2105023 77 + tRNA-Asp-
13NA YP_008246150.1 2105147-2105254 108 + hypothetical protein-
14NA YP_008246151.1 2105345-2106400 1056 - putative cytoplasmic protein-
15NA YP_008246152.1 2106411-2107406 996 - type VI secretion protein-
16NA YP_008246153.1 2107403-2109286 1884 - Protein ImpG/VasAVirulence
17NA YP_008246154.1 2109302-2109796 495 - hypothetical protein-
18NA YP_008246155.1 2109793-2110617 825 - Protein of avirulence locus ImpE-
19NA YP_008246156.1 2110604-2111506 903 - hypothetical protein-
20NA YP_008246157.1 2111874-2114513 2640 + ClpB proteinVirulence
21NA YP_008246158.1 2114613-2115155 543 + hypothetical proteinVirulence
22NA YP_008246159.1 2115179-2116687 1509 + Type VI protein secretion systemVirulence
23NA YP_008246160.1 2116740-2117141 402 + hypothetical protein-
24NA YP_008246161.1 2117113-2117538 426 + hypothetical protein-
25NA YP_008246162.1 2117775-2118260 486 + Protein hcp1Virulence
26NA YP_008246163.1 2118563-2119048 486 + Type VI secretion system-associated protein-
27NA YP_008246164.1 2119045-2119416 372 + putative periplasmic protein-
28NA YP_008246165.1 2119559-2120044 486 + Protein hcp1Virulence
29NA YP_008246166.1 2120112-2120648 537 + hypothetical protein-
30NA YP_008246167.1 2120652-2121995 1344 + type VI secretion protein-
31NA YP_008246168.1 2121992-2123296 1305 + hypothetical protein-
32NA YP_008246169.1 2123301-2124074 774 + hypothetical protein-
33NA YP_008246170.1 2124352-2124708 357 + putative shiga-like toxin A subunit-
34NA YP_008246171.1 2124742-2128611 3870 + Type VI secretion protein IcmF-
35NA YP_008246172.1 2128611-2129378 768 + type VI secretion system-associated protein-
36NA YP_008246173.1 2129421-2129891 471 + hypothetical protein-
37NA YP_008246174.1 2129876-2130337 462 + hypothetical protein-
38NA YP_008246175.1 2130346-2130468 123 + hypothetical protein-
39NA YP_008246176.1 2130465-2130881 417 + hypothetical protein-
40NA YP_008246177.1 2130908-2131426 519 + SPI-6 associated protein-
41NA YP_008246178.1 2131823-2134054 2232 + VgrG protein-


tRNA-Asp tRNA-Asp