Home PAIs REIs Genomes Search Links |
|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Salmonella enterica CFSAN002069 (NC_021812) Location : 388535 - 430419 bp Size : 41885 bp GC content : 47.5 % GC bias (=GCregion - GCgenome) : -4.61 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | tRNA-Val | - | 388535-388611 | 77 | + | tRNA-Val | - |
2 | tRNA-Val | - | 388622-388698 | 77 | + | tRNA-Val | - |
3 | NA | YP_008249238.1 | 388856-389914 | 1059 | - | secretion system apparatus protein SsaU | Virulence |
4 | NA | YP_008249239.1 | 389911-390690 | 780 | - | type III secretion system protein SsaT | Virulence |
5 | fliQ | YP_008249240.1 | 390691-390957 | 267 | - | flagellar biosynthesis protein FliQ | Virulence |
6 | ssaR | YP_008249241.1 | 390954-391601 | 648 | - | flagellar biosynthesis protein FliP | Virulence |
7 | NA | YP_008249242.1 | 391669-392637 | 969 | - | type III secretion system protein SsaQ | Virulence |
8 | NA | YP_008249243.1 | 392618-392992 | 375 | - | type III secretion system protein SsaP | Virulence |
9 | NA | YP_008249244.1 | 392973-393350 | 378 | - | type III secretion system protein SsaO | Virulence |
10 | NA | YP_008249245.1 | 393353-394654 | 1302 | - | type III secretion system ATPase | Virulence |
11 | NA | YP_008249246.1 | 394644-396689 | 2046 | - | secretion system apparatus protein SsaV | Virulence |
12 | NA | YP_008249247.1 | 396674-397042 | 369 | - | type III secretion system protein SsaM | Virulence |
13 | NA | YP_008249248.1 | 397100-398116 | 1017 | - | type III secretion system protein SsaL | Virulence |
14 | NA | YP_008249249.1 | 398082-398756 | 675 | - | type III secretion system protein SsaK | Virulence |
15 | NA | YP_008249250.1 | 398753-399025 | 273 | - | pathogenicity island protein | - |
16 | NA | YP_008249251.1 | 399319-400068 | 750 | - | type III secretion system lipoprotein SsaJ | Virulence |
17 | NA | YP_008249252.1 | 400065-400328 | 264 | - | type III secretion system protein SsaI | Virulence |
18 | NA | YP_008249253.1 | 400325-400615 | 291 | - | type III secretion system protein SsaH | Virulence |
19 | NA | YP_008249254.1 | 400593-400808 | 216 | - | type III secretion system needle protein SsaG | Virulence |
20 | NA | YP_008249255.1 | 400902-401489 | 588 | - | pathogenicity island 2 effector protein SseG | Virulence |
21 | NA | YP_008249256.1 | 401588-402370 | 783 | - | pathogenicity island 2 effector protein SseF | Virulence |
22 | NA | YP_008249257.1 | 402386-402820 | 435 | - | type III secretion system chaperone protein SscB | Virulence |
23 | NA | YP_008249258.1 | 402872-403288 | 417 | - | pathogenicity island 2 effector protein SseE | Virulence |
24 | NA | YP_008249259.1 | 403291-403878 | 588 | - | pathogenicity island 2 effector protein SseD | Virulence |
25 | NA | YP_008249260.1 | 403894-405348 | 1455 | - | pathogenicity island 2 effector protein SseC | Virulence |
26 | NA | YP_008249261.1 | 405351-405824 | 474 | - | pathogenicity island 2 chaperone protein SscA | Virulence |
27 | NA | YP_008249262.1 | 405821-406411 | 591 | - | pathogenicity island 2 effector protein SseB | Virulence |
28 | NA | YP_008249263.1 | 406418-406741 | 324 | - | type III secretion system chaperone SseA | Virulence |
29 | NA | YP_008249264.1 | 407008-407250 | 243 | - | type III secretion system chaperone SsaE | Virulence |
30 | NA | YP_008249265.1 | 407258-408469 | 1212 | - | type III secretion system protein SsaD | Virulence |
31 | NA | YP_008249266.1 | 408450-409943 | 1494 | - | outer membrane secretin SsaC | Virulence |
32 | spiC | YP_008249267.1 | 409945-410328 | 384 | - | pathogenicity island chaperone protein SpiC | Virulence |
33 | NA | YP_008249268.1 | 410747-413509 | 2763 | + | transcriptional regulator | Virulence |
34 | NA | YP_008249269.1 | 413540-414178 | 639 | + | transcriptional regulator | Virulence |
35 | NA | YP_008249270.1 | 414357-415085 | 729 | + | MerR family transcriptional regulator | Virulence |
36 | NA | YP_008249271.1 | 415258-416217 | 960 | + | membrane protein | Virulence |
37 | NA | YP_008249272.1 | 416313-416525 | 213 | - | hypothetical protein | Virulence |
38 | NA | YP_008249273.1 | 416623-417243 | 621 | - | Tetrathionate response regulatory protein TtrR | Virulence |
39 | NA | YP_008249274.1 | 417218-418996 | 1779 | - | histidine kinase | Virulence |
40 | NA | YP_008249275.1 | 419178-419912 | 735 | + | polysulfide reductase subunit B | Virulence |
41 | NA | YP_008249276.1 | 419913-420935 | 1023 | + | tetrathionate reductase subunit C | Virulence |
42 | NA | YP_008249277.1 | 420928-423990 | 3063 | + | tetrathionate reductase subunit A | Virulence |
43 | NA | YP_008249278.1 | 424313-425539 | 1227 | + | regulatory protein | Virulence |
44 | NA | YP_008249279.1 | 425551-426288 | 738 | + | hypothetical protein | Virulence |
45 | NA | YP_008249280.1 | 426347-427240 | 894 | + | hydrolase | Virulence |
46 | NA | YP_008249281.1 | 427262-428605 | 1344 | + | amino acid permease | Virulence |
47 | NA | YP_008249282.1 | 428646-428822 | 177 | - | hypothetical protein | - |
48 | NA | YP_008249283.1 | 429007-430419 | 1413 | + | pyruvate kinase | Virulence |