PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli PMV-1 (NC_022370)
Location : 1105946 - 1152156 bp
Size : 46211 bp
GC content : 48.9 %
GC bias (=GCregion - GCgenome) : -1.86 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_008570951.1 1105946-1106458 513 + hypothetical proteinVirulence
2NA YP_008570952.1 1106700-1107269 570 + hypothetical protein-
3NA YP_008570953.1 1107544-1107765 222 - P fimbrial regulatory protein KS71AVirulence
4papB YP_008570954.1 1108184-1108513 330 + Major pilu subunit operon regulatory protein papBVirulence
5sfaA YP_008570955.1 1108888-1109433 546 + S-fimbrillinVirulence
6fimF_1 YP_008570956.1 1109597-1110043 447 + hypothetical proteinVirulence
7focC_2 YP_008570957.1 1110084-1110779 696 + Chaperone protein focC precursorVirulence
8fimD_1 YP_008570958.1 1110849-1113479 2631 + Outer membrane usher protein fimD precursorVirulence
9sfaG YP_008570959.1 1113492-1114019 528 + S-fimbrial protein subunit SfaG precursorVirulence
10sfaS YP_008570960.1 1114041-1114532 492 + S-fimbrial adhesin protein SfaS precursorVirulence
11sfaH YP_008570961.1 1114525-1115493 969 + S-fimbrial protein subunit SfaHVirulence
12cdgR_1 YP_008570962.1 1115797-1116537 741 + Cyclic di-GMP regulator CdgR-
13marR_2 YP_008570963.1 1116735-1117235 501 + Multiple antibiotic resistance protein marRVirulence
14fepA_2 YP_008570964.1 1117729-1119906 2178 + Enterobactin outer-membrane receptorVirulence
15besA YP_008570965.1 1119951-1120907 957 - Ferri-bacillibactin esterase BesAVirulence
16fes_2 YP_008570966.1 1120992-1122221 1230 - Ferric enterobactin esteraseVirulence
17NA YP_008570967.1 1122325-1125984 3660 - Putative multidrug export ATP-binding/permease proteinVirulence
18NA YP_008570968.1 1126124-1127239 1116 - Glycosyl transferases, related to UDP-glucuronosyltransferaseVirulence
19NA YP_008570969.1 1128134-1128451 318 - hypothetical protein-
20NA YP_008570970.1 1129363-1129797 435 + hypothetical protein-
21tRNA-Arg - 1130005-1130081 77 + tRNA-Arg-
22NA YP_008570971.1 1130256-1130372 117 + hypothetical protein-
23tnpA_1 YP_008570972.1 1130360-1130704 345 - Transposase for transposon Tn5-
24tnpA_2 YP_008570973.1 1130830-1131723 894 - Transposase for transposon Tn5-
25hxuC_1 YP_008570974.1 1132069-1134039 1971 + Heme/hemopexin utilization protein C precursorVirulence
26NA YP_008570975.1 1134058-1134849 792 + hypothetical proteinVirulence
27yjiA_1 YP_008570976.1 1135050-1136312 1263 + putative GTP-binding protein YjiAVirulence
28NA YP_008570977.1 1136419-1136601 183 - hypothetical proteinVirulence
29hcpC YP_008570978.1 1137262-1138398 1137 + Putative beta-lactamase hcpC precursor-
30NA YP_008570979.1 1138434-1138859 426 + hypothetical protein-
31NA YP_008570980.1 1138853-1138975 123 + hypothetical protein-
32NA YP_008570981.1 1140825-1141058 234 - hypothetical protein-
33era_1 YP_008570982.1 1141945-1142817 873 + GTPase EraVirulence
34flu_1 YP_008570983.1 1143190-1146036 2847 + Fluffing proteinVirulence
35NA YP_008570984.1 1146367-1147188 822 + hypothetical proteinVirulence
36NA YP_008570985.1 1147188-1147433 246 + hypothetical protein-
37NA YP_008570986.1 1147527-1148000 474 + Antirestriction proteinVirulence
38ykfG_1 YP_008570987.1 1148016-1148492 477 + hypothetical proteinVirulence
39NA YP_008570988.1 1148555-1148776 222 + hypothetical proteinVirulence
40NA YP_008570989.1 1148795-1149439 645 + hypothetical protein-
41yeeU_1 YP_008570990.1 1149489-1149866 378 + Antitoxin YeeUVirulence
42cbtA_1 YP_008570991.1 1149913-1150287 375 + Toxin YeeVVirulence
43NA YP_008570992.1 1150284-1150775 492 + hypothetical proteinVirulence
44NA YP_008570993.1 1150742-1150984 243 + hypothetical proteinVirulence
45NA YP_008570994.1 1151077-1151919 843 + hypothetical proteinVirulence
46tRNA-Ser - 1152069-1152156 88 - tRNA-Ser-


tRNA-Arg tRNA-Ser