Gene Information

Name : ccmK (sll1028)
Accession : NP_440095.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_000911
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism protein CcmK
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 218742 - 219077 bp
Length : 336 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAATTGCAGTTGGGATGATCGAAACCCTTGGGTTTCCCGCCGTTGTGGAGGCCGCCGACTCCATGGTTAAAGCCGC
CCGGGTTACCCTGGTGGGCTACGAAAAAATTGGTAGCGGCCGAGTCACCGTGATTGTGCGGGGTGACGTGTCCGAGGTAC
AGGCCTCAGTGACCGCTGGCATTGAAAACATCCGTCGGGTAAACGGTGGTGAAGTTTTGTCTAACCACATTATTGCCCGT
CCCCACGAAAACCTGGAGTATGTGCTACCCATTCGCTACACCGAGGCGGTGGAACAGTTCCGGGAAATCGTTAATCCTTC
CATCATCCGCCGTTAA

Protein sequence : 
MSIAVGMIETLGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVTAGIENIRRVNGGEVLSNHIIAR
PHENLEYVLPIRYTEAVEQFREIVNPSIIRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-16 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmK NP_440095.1 carbon dioxide concentrating mechanism protein CcmK VFG1596 Protein 9e-18 54
ccmK NP_440095.1 carbon dioxide concentrating mechanism protein CcmK VFG1598 Protein 2e-16 52
ccmK NP_440095.1 carbon dioxide concentrating mechanism protein CcmK VFG1597 Protein 1e-16 49