Name : rnhA (jhp0606) Accession : NP_223324.1 Strain : Helicobacter pylori J99 Genome accession: NC_000921 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 671961 - 672392 bp Length : 432 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCAAGAAATTGAAATTTTTTGCGATGGCTCTTCTTTAGGCAATCCCGGGCCAGGCGGGTATGCGGCGATTTTACGCTA TAAAGATAAAGAAAAAACCATCAGTGGGGGCGAAAATTTCACCACGAATAACCGCATGGAATTAAGAGCGCTCAATGAAG CCTTAAAAATTTTGAAACGCCCATGCCATATCACGCTTTATAGCGATTCGCAATACGTGTGCCAAGCGATCAATGTGTGG CTAGTTAACTGGCAAAAAAAGAATTTTGCTAAAGTCAAAAATGTGGATTTATGGAAAGAATTTGTAAAAGTCTCTAAAGG GCATTCTATTGTGGCTGTTTGGATCAAGGGGCATAACGGGCATGCCGAGAATGAACGATGCAATAGCCTCGCTAAATTAG AGGCGCAAAAACGGGTCAAAACGACCACTTAA Protein sequence : MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVW LVNWQKKNFAKVKNVDLWKEFVKVSKGHSIVAVWIKGHNGHAENERCNSLAKLEAQKRVKTTT |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-28 | 51 |