|
Name : gap (Rv1436) Accession : NP_215952.1 Strain : Mycobacterium tuberculosis H37Rv Genome accession: NC_000962 Putative virulence/resistance : Unknown Product : Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH) Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : - Position : 1613307 - 1614326 bp Length : 1020 bp Strand : + Note : Rv1436, (MTCY493.18c), len: 339 aa. Probable gap,Glyceraldehyde 3-phosphate dehydrogenase, highly similar to many e.g. G3P_MYCLE|P46713 Mycobacterium leprae (339 aa),FASTA scores: opt: 1933, E():0, (89.1% identity in 339 aa overlap). Contains PS00071 Glyc DNA sequence : GTGACGGTCCGAGTAGGCATCAACGGGTTTGGTCGAATCGGACGCAACTTCTACCGGGCCTTACTGGCCCAACAGGAGCA GGGCACCGCCGACGTGGAGGTGGTCGCCGCCAACGACATCACCGACAACAGCACGCTGGCGCATCTGCTCAAATTCGACT CGATTCTGGGCCGGCTGCCTTGCGATGTCGGCCTCGAAGGCGACGACACCATCGTCGTCGGCCGCGCGAAAATCAAGGCG CTCGCGGTCCGGGAGGGGCCGGCGGCATTGCCATGGGGAGACCTCGGCGTCGACGTCGTCGTCGAATCCACCGGCCTGTT CACCAATGCGGCCAAAGCCAAAGGCCACCTGGACGCCGGCGCCAAGAAGGTGATCATCTCTGCGCCCGCCACCGACGAGG ACATCACCATCGTCCTGGGAGTTAACGACGACAAGTATGACGGCAGCCAGAACATCATCTCCAATGCGTCGTGCACCACG AACTGCCTTGCGCCGCTGGCCAAAGTGCTCGACGATGAGTTCGGCATCGTCAAGGGCCTGATGACCACCATCCACGCCTA CACTCAGGATCAGAACCTGCAGGACGGGCCGCACAAGGACCTGCGTCGCGCCCGCGCCGCCGCGCTGAACATCGTGCCGA CCTCCACCGGCGCGGCCAAGGCCATCGGCCTGGTGATGCCGCAGCTAAAGGGCAAGCTCGACGGTTATGCGCTGCGGGTG CCGATCCCCACCGGCTCGGTCACCGACCTTACGGTCGACTTATCCACACGGGCCAGTGTCGATGAGATCAACGCGGCGTT CAAAGCCGCGGCCGAAGGCAGGCTCAAGGGCATTCTGAAGTACTACGACGCGCCGATCGTCTCGAGCGACATCGTCACCG ACCCGCACAGTTCGATTTTCGACTCTGGGTTGACCAAAGTCATCGACGACCAGGCCAAGGTGGTGTCGTGGTACGACAAC GAGTGGGGCTACTCCAACCGCCTGGTTGATCTGGTCACGCTGGTCGGCAAGTCGCTCTAG Protein sequence : MTVRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAANDITDNSTLAHLLKFDSILGRLPCDVGLEGDDTIVVGRAKIKA LAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKYDGSQNIISNASCTT NCLAPLAKVLDDEFGIVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLVMPQLKGKLDGYALRV PIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDDQAKVVSWYDN EWGYSNRLVDLVTLVGKSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 4e-60 | 42 |
