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Name : rnhA (RP726) Accession : NP_221081.1 Strain : Rickettsia prowazekii Madrid E Genome accession: NC_000963 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 913329 - 913787 bp Length : 459 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGGATTCCAAAGTAGTTATATATACTGATGGTGCATGTTCAGGTAATCCAGGTCCAGGAGGATGGGGAGCTTTATTACA TTTTAATGATACTAGTAAAAAAATATTTGGATATGAGTTAGTTACGACTAATAATCGTATGGAAATGACTGCAGCACTTG AAGCGTTAAGGATTTTAAAAAAATCTTCTGTCGTTGAGATTTATACCGATAGCAAGTATTTGCAACATGGCATTACTGTT TGGATTCATAATTGGATAAAAAATAATTGGTGTAAAAGCAACAATGCCCCCGTTAAAAATGCTGATTTATGGCAAAAACT ATACTCAGAATTGAGTAAACATACTATTATGTGGAAATGGGTCAAAGGTCATGCAAGTAATAGCGGTAATATTGCTGCCG ATAAGCTTGCAGTGCAAGGACGAGAAACTGCTATGGAAATTTTAAAATGTCTTGGATAG Protein sequence : MDSKVVIYTDGACSGNPGPGGWGALLHFNDTSKKIFGYELVTTNNRMEMTAALEALRILKKSSVVEIYTDSKYLQHGITV WIHNWIKNNWCKSNNAPVKNADLWQKLYSELSKHTIMWKWVKGHASNSGNIAADKLAVQGRETAMEILKCLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 7e-28 | 45 |
