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Name : RP732 (RP732) Accession : NP_221085.1 Strain : Rickettsia prowazekii Madrid E Genome accession: NC_000963 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : - Position : 916436 - 917125 bp Length : 690 bp Strand : + Note : 3'-5' exonuclease of DNA polymerase III DNA sequence : ATGTCGAGTTTAAGAGAAATAATTTTAGATACTGAAACTACGGGACTTGATCCACAACAAGGTCATCGAATTGTTGAGAT CGGTGCAATTGAGATGGTAAATAAGGTATTAACAGGCAAGCATTTTCATTTTTATATTAATCCTGAACGCGATATGCCTT TTGAGGCTTATAAGATTCACGGTATCTCAGGAGAATTTTTAAAAGATAAACCTCTGTTTAAGACAATAGCCAATGATTTT TTAAAGTTTATAGCAGATAGTACACTTATTATTCATAATGCTCCTTTCGATATTAAATTTCTAAATCATGAATTATCTTT ATTAAAGAGAACCGAAATTAAATTTTTGGAACTAACGAATACTATAGATACTCTAGTTATGGCAAGGAATATGTTTCCTG GAGCAAGATATAGTCTTGATGCATTATGTAAAAGATTTAAAGTTGATAATTCAGGTAGGCAACTTCATGGAGCTTTAAAA GATGCAGCATTACTTGCAGAAGTGTATGTTGCACTAACAGGAGGTAGACAATCTACTTTTAAGATGATTAATAAACCTGA TGAAATAAACAACTTGGCAGTTAAGTGTGTAGATGTCCAGCAAATAAAAAGAGGTATTGTTGTTAAGCCTACTAAAGAAG AATTACAAAAACATAAAGAGTTCATAGATAAGATTTTAATACAGGCTTAA Protein sequence : MSSLREIILDTETTGLDPQQGHRIVEIGAIEMVNKVLTGKHFHFYINPERDMPFEAYKIHGISGEFLKDKPLFKTIANDF LKFIADSTLIIHNAPFDIKFLNHELSLLKRTEIKFLELTNTIDTLVMARNMFPGARYSLDALCKRFKVDNSGRQLHGALK DAALLAEVYVALTGGRQSTFKMINKPDEINNLAVKCVDVQQIKRGIVVKPTKEELQKHKEFIDKILIQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 3e-45 | 48 |
